Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30593.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 116 8e-26
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 116 8e-26
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 116 8e-26
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 116 8e-26
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 116 8e-26
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 116 1e-25
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 31 4.0
AL445212-3|CAI40478.1| 3013|Homo sapiens furry homolog (Drosophi... 31 5.2
AL138692-1|CAI13379.1| 3013|Homo sapiens furry homolog (Drosophi... 31 5.2
AL137143-1|CAI12629.1| 3013|Homo sapiens furry homolog (Drosophi... 31 5.2
AL049784-1|CAB42442.1| 3012|Homo sapiens hypothetical protein pr... 31 5.2
AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein. 31 5.2
Z69028-1|CAA93152.1| 494|Homo sapiens beta 2 isoform of 61kDa r... 30 9.1
L42374-1|AAC37602.1| 497|Homo sapiens protein phosphatase 2A B5... 30 9.1
BC045619-1|AAH45619.1| 497|Homo sapiens PPP2R5B protein protein. 30 9.1
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 116 bits (279), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 116 bits (278), Expect = 1e-25
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +3
Query: 255 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 434
NSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPSS
Sbjct: 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSS 108
Query: 435 AAQCVAYVAVAELPVGQWNDLIPIL 509
A+QCVA +A AE+PV QW +LIP L
Sbjct: 109 ASQCVAGIACAEIPVNQWPELIPQL 133
Score = 88.2 bits (209), Expect = 2e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 509 VENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLA 688
V NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V+LA
Sbjct: 134 VANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 193
Query: 689 AT 694
AT
Sbjct: 194 AT 195
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 112 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGG 255
+ LI ILEKTVSPDR ELEAA ++L+ AA N TF+ LS VL G
Sbjct: 1 MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPG 48
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
protein.
Length = 1264
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 152 IEMNWKQQLDTSTMLPPQISQHSSKCCPMSFSKVEQSSG*DGSWFAIEKS 301
IE W+ +T PP++ +S CCP S S SSG GS A+E +
Sbjct: 141 IESPWQPAGRAATPFPPEVGVRTSTCCP-SPSPFRPSSG--GSVAAMESA 187
>AL445212-3|CAI40478.1| 3013|Homo sapiens furry homolog (Drosophila)
protein.
Length = 3013
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 516 FSTELVLDHSIVLLGAQLLPHTPHTVLLNLDDY 418
F TE+V+DHS+ A LP H V L LD Y
Sbjct: 1646 FMTEMVVDHSVREDWALHLPLLLHAVFLGLDHY 1678
>AL138692-1|CAI13379.1| 3013|Homo sapiens furry homolog (Drosophila)
protein.
Length = 3013
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 516 FSTELVLDHSIVLLGAQLLPHTPHTVLLNLDDY 418
F TE+V+DHS+ A LP H V L LD Y
Sbjct: 1646 FMTEMVVDHSVREDWALHLPLLLHAVFLGLDHY 1678
>AL137143-1|CAI12629.1| 3013|Homo sapiens furry homolog (Drosophila)
protein.
Length = 3013
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 516 FSTELVLDHSIVLLGAQLLPHTPHTVLLNLDDY 418
F TE+V+DHS+ A LP H V L LD Y
Sbjct: 1646 FMTEMVVDHSVREDWALHLPLLLHAVFLGLDHY 1678
>AL049784-1|CAB42442.1| 3012|Homo sapiens hypothetical protein
protein.
Length = 3012
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 516 FSTELVLDHSIVLLGAQLLPHTPHTVLLNLDDY 418
F TE+V+DHS+ A LP H V L LD Y
Sbjct: 1645 FMTEMVVDHSVREDWALHLPLLLHAVFLGLDHY 1677
>AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein.
Length = 1849
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 516 FSTELVLDHSIVLLGAQLLPHTPHTVLLNLDDY 418
F TE+V+DHS+ A LP H V L LD Y
Sbjct: 1050 FMTEMVVDHSVREDWALHLPLLLHAVFLGLDHY 1082
>Z69028-1|CAA93152.1| 494|Homo sapiens beta 2 isoform of 61kDa
regulatory subunit of PP2A protein.
Length = 494
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/58 (20%), Positives = 26/58 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 243
H +K+ HA+ ++Q LEK + + + ++Y T F+ + ++L
Sbjct: 283 HSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEIL 340
>L42374-1|AAC37602.1| 497|Homo sapiens protein phosphatase 2A
B56-beta protein.
Length = 497
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/58 (20%), Positives = 26/58 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 243
H +K+ HA+ ++Q LEK + + + ++Y T F+ + ++L
Sbjct: 286 HSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEIL 343
>BC045619-1|AAH45619.1| 497|Homo sapiens PPP2R5B protein protein.
Length = 497
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/58 (20%), Positives = 26/58 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 243
H +K+ HA+ ++Q LEK + + + ++Y T F+ + ++L
Sbjct: 286 HSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEIL 343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,869,432
Number of Sequences: 237096
Number of extensions: 1987003
Number of successful extensions: 8179
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8179
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -