Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30593.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53480.1 68418.m06646 importin beta-2, putative similar to im... 55 4e-08
At4g27640.1 68417.m03973 importin beta-2 subunit family protein ... 42 3e-04
At4g38420.1 68417.m05430 multi-copper oxidase type I family prot... 37 0.015
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 35 0.060
At1g75790.1 68414.m08803 multi-copper oxidase type I family prot... 33 0.14
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 32 0.32
At1g41830.1 68414.m04829 multi-copper oxidase type I family prot... 31 0.56
At1g76160.1 68414.m08844 multi-copper oxidase type I family prot... 31 0.73
At5g66920.1 68418.m08435 multi-copper oxidase type I family prot... 30 1.3
At3g25840.1 68416.m03219 protein kinase family protein contains ... 30 1.7
At1g21860.1 68414.m02736 multi-copper oxidase type I family prot... 29 2.2
At4g22010.1 68417.m03185 multi-copper oxidase type I family prot... 29 3.0
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 29 3.9
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 29 3.9
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 29 3.9
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 28 5.2
At5g47690.1 68418.m05887 expressed protein 28 6.8
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 27 9.0
>At5g53480.1 68418.m06646 importin beta-2, putative similar to
importin-beta2 [Oryza sativa (japonica cultivar-group)]
GI:3983665; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 870
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 548 KEATLEAIGYICQDIDAEVLT-ERSNQILTAIIHGMRSTEPSNHVRLAATQ 697
K+ATLE +GY+C+++ +V+ E N+ILTA++ GM + E + VRLAAT+
Sbjct: 148 KQATLETLGYLCEEVSPDVVEQEHVNKILTAVVQGMNAAEGNTDVRLAATR 198
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 267 ARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQ 443
+R AGL LKN L +K+ K + QRWLAL + I+ +L + S+A+Q
Sbjct: 55 SRKLAGLVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQ 114
Query: 444 CVAYVAVAELPVGQWNDLI 500
+A VA ELP QW +LI
Sbjct: 115 VIAKVAGIELPQKQWPELI 133
>At4g27640.1 68417.m03973 importin beta-2 subunit family protein low
similarity to importin 4 GI:18700635 from [Homo sapiens]
Length = 1048
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 LKQQYQQRWLALAEDVRLYIKENILAAIGTENSRP--SSAAQCVAYVAVAELPVGQWNDL 497
L+++ W L+ ++ ++K++++ +I ENS P ++A V+ VA +P G+W DL
Sbjct: 60 LRKRITGHWAKLSPQLKQHVKQSLIESITVENSPPVRRASANVVSVVAKYAVPAGEWPDL 119
Query: 498 IPIL 509
+ L
Sbjct: 120 LTFL 123
>At4g38420.1 68417.m05430 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
N++ NV N L FL ++ + + Y+ G+ CP TYA ++G F
Sbjct: 69 NLIINVHNDLDEPFLLSWNGVQLRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFY 128
Query: 412 VPIAA 398
P A
Sbjct: 129 FPSLA 133
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 34.7 bits (76), Expect = 0.060
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 270 RMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCV 449
R AAGL LKN+L P++ Q+ Q+ YIK +L +G + + +
Sbjct: 69 RQAAGLLLKNNLRGAYPSMTQENQK-----------YIKSELLPCLGAADRNIRTTVGTI 117
Query: 450 AYVAVAELPVGQWNDLIPIL 509
V V V W++L+P L
Sbjct: 118 ISVIVNIEGVSGWHELLPAL 137
>At1g75790.1 68414.m08803 multi-copper oxidase type I family protein
contains Pfam profile: PF00394 Multicopper oxidase
Length = 545
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -2
Query: 589 ILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFSV 410
I+ N+ N+L FL ++ L + ++ G+R +CP TY ++G F
Sbjct: 67 IVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYF 126
Query: 409 P 407
P
Sbjct: 127 P 127
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
N++ NV N L FL +S + Y+ G+ CP TYA ++G +
Sbjct: 68 NLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYY 127
Query: 412 VP 407
P
Sbjct: 128 FP 129
>At1g41830.1 68414.m04829 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 542
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
N++ NV NSL FL ++ + Y G+ CP + TY ++G +
Sbjct: 68 NLIINVHNSLDEPFLISWNGVQNRRNSYVDGMYGTTCPIPPRSNYTYILQVKDQIGSFYY 127
Query: 412 VPIAA 398
P A
Sbjct: 128 FPSLA 132
>At1g76160.1 68414.m08844 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
N++ NV NSL FL ++ + + G+ CP TY ++G +
Sbjct: 67 NLIINVYNSLDEPFLLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQIGSFYY 126
Query: 412 VP 407
P
Sbjct: 127 FP 128
>At5g66920.1 68418.m08435 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 546
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
NI+ N+ N L FL ++ + ++ G+ +CP ++ TY ++G
Sbjct: 76 NIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFNY 135
Query: 412 VPIAA 398
P A
Sbjct: 136 FPSTA 140
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 76 LKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYL 186
++N+ETMH + +QIL+K DR + VR+L
Sbjct: 652 IRNNETMHKAGKIE-VQILKKLAGADREDRRHCVRFL 687
>At1g21860.1 68414.m02736 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 538
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
N++ NV N L FL ++ + ++ G+ CP TYA ++G +
Sbjct: 68 NLIINVFNHLDEPFLLSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQVKDQIGSFYY 127
Query: 412 VP 407
P
Sbjct: 128 FP 129
>At4g22010.1 68417.m03185 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 592 NILTNVANSLQSRFLFEFSRLDMNNIFYRIGIRSFHCPTGSSATATYATHCAAELGRLFS 413
NI+ +V N L+ FL ++ + ++ G+ CP TY ++G +
Sbjct: 65 NIIISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYY 124
Query: 412 VPIAA 398
P A
Sbjct: 125 FPSLA 129
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSD 237
H +KN + H L + L T++ + + L RYLD T + +K L D
Sbjct: 343 HYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCD 398
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSD 237
H +KN + H L + L T++ + + L RYLD T + +K L D
Sbjct: 343 HYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCD 398
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 70 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSD 237
H +KN + H L + L T++ + + L RYLD T + +K L D
Sbjct: 345 HYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCD 400
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 28.3 bits (60), Expect = 5.2
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Frame = +3
Query: 195 CHHKFHNIHQNVVRCPSPRWNSQVARMAAGLQLKNHLTSKDPTLK----QQYQQRWLALA 362
C++ F QN + PR+ S+ RM + L + + T+K QR A +
Sbjct: 97 CNYYFRKSSQNNINLRPPRFRSEFLRMLVKVALDQAVITHSQTVKFGPSCTNNQRKAAWS 156
Query: 363 EDVRLYIKENILAAIGTE----NSRPSSAAQCVAYVAVAELPVGQWN 491
+ V L+ +N +A + N SS +C + A L Q N
Sbjct: 157 DCVNLF--QNTVAQLNRTLKGLNPAASSDVKCTDFDAQTWLSTAQTN 201
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 207 FHNIHQNVVRCPSPRWNSQVARMAAGLQLKNHLTSKDPTLK 329
FH+I Q+ + + + A GL + NHLT K+P L+
Sbjct: 1031 FHSIKQSEDVTDATKSKNSHAICELGLSIINHLTQKEPDLQ 1071
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 595 INILTNVANSLQSRFLFEFSRLDMNNIFY 509
++ILT V + SRFLF S + MN + Y
Sbjct: 820 VDILTPVQVAKLSRFLFAVSHIAMNQLVY 848
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,429,820
Number of Sequences: 28952
Number of extensions: 284620
Number of successful extensions: 851
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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