Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30588.Seq
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 94 1e-19
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 89 3e-18
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 89 3e-18
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 78 1e-14
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 78 1e-14
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 34 0.12
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 34 0.12
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28731-9|AAA68301.2| 437|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 30 2.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 30 2.5
Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical pr... 29 4.4
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 93.9 bits (223), Expect = 1e-19
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Frame = +2
Query: 362 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI 541
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 542 TS--TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SCINVFSTGI 715
T H T GFF++H+GWL VR P +E+ + + VF
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHP-QVKEQGAKLDMSDLLSDPVLVFQ--- 191
Query: 716 RKHFIPIV---CFGLPTILPVILW 778
RKH+ P+V CF LPTI+PV W
Sbjct: 192 RKHYFPLVILCCFILPTIIPVYFW 215
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWP---FSWI-----RVPVLCSSND-WR 408
P + EIV++N+ + LH GLY AKW F+++ + ++ W
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 409 YSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG
Sbjct: 102 HK-SYKATTPMRIFLMI-----LNNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRG 153
Query: 589 LLLFSYR--LVVRQXNTLK 639
F++ L+VR+ +K
Sbjct: 154 -FFFAHMGWLLVRKHPQVK 171
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 93.9 bits (223), Expect = 1e-19
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Frame = +2
Query: 362 SVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESI 541
+V F +L YV G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 542 TS--TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SCINVFSTGI 715
T H T GFF++H+GWL VR P +E+ + + VF
Sbjct: 137 HHKWTDTDADPHNTTR-GFFFAHMGWLLVRKHP-QVKEQGAKLDMSDLLSDPVLVFQ--- 191
Query: 716 RKHFIPIV---CFGLPTILPVILW 778
RKH+ P+V CF LPTI+PV W
Sbjct: 192 RKHYFPLVILCCFILPTIIPVYFW 215
Score = 58.0 bits (134), Expect = 8e-09
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWP---FSWI-----RVPVLCSSND-WR 408
P + EIV++N+ + LH GLY AKW F+++ + ++ W
Sbjct: 42 PYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWS 101
Query: 409 YSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRG 588
+ S + P I I N ++ Q+ W RDHR HHK++DTDADPHN +RG
Sbjct: 102 HK-SYKATTPMRIFLMI-----LNNIAL--QNDVIEWARDHRCHHKWTDTDADPHNTTRG 153
Query: 589 LLLFSYR--LVVRQXNTLK 639
F++ L+VR+ +K
Sbjct: 154 -FFFAHMGWLLVRKHPQVK 171
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 89.4 bits (212), Expect = 3e-18
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITS- 547
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 548 -TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SCINVFSTGIRKH 724
T H T GFF++H+GWL VR P +E + + VF RKH
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHP-QVKEHGGKLDLSDLFSDPVLVFQ---RKH 193
Query: 725 FIPIV---CFGLPTILPVILW 778
+ P+V CF LPTI+PV W
Sbjct: 194 YFPLVILFCFILPTIIPVYFW 214
Score = 58.8 bits (136), Expect = 5e-09
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPFSWIRVPVLCSSNDWRYSWSSQTVV 435
P + EIV++N+ + LHV GLY AKW + + S + + + +
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSG-FGITAGAHRLW 99
Query: 436 PQIIQSKITSSNPTNGL--SFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGLLLFSYR 609
T L + Q+ W RDHR HHK++DTDADPHN +RG F++
Sbjct: 100 SHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG-FFFTHM 158
Query: 610 --LVVRQXNTLK 639
L+VR+ +K
Sbjct: 159 GWLLVRKHPQVK 170
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 89.4 bits (212), Expect = 3e-18
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Frame = +2
Query: 371 FAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPIGFETIESITS- 547
F++ YV + G+TAGAHRLWSHKSYKA P++I LM+ ++A Q I +
Sbjct: 79 FSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHK 138
Query: 548 -TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SCINVFSTGIRKH 724
T H T GFF++H+GWL VR P +E + + VF RKH
Sbjct: 139 WTDTDADPHNTTR-GFFFTHMGWLLVRKHP-QVKEHGGKLDLSDLFSDPVLVFQ---RKH 193
Query: 725 FIPIV---CFGLPTILPVILW 778
+ P+V CF LPTI+PV W
Sbjct: 194 YFPLVILFCFILPTIIPVYFW 214
Score = 58.8 bits (136), Expect = 5e-09
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Frame = +1
Query: 256 PREYEIVYKNIFIHIYLHVTMFYGLYLCCTTAKWPFSWIRVPVLCSSNDWRYSWSSQTVV 435
P + EIV++N+ + LHV GLY AKW + + S + + + +
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSG-FGITAGAHRLW 99
Query: 436 PQIIQSKITSSNPTNGL--SFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGLLLFSYR 609
T L + Q+ W RDHR HHK++DTDADPHN +RG F++
Sbjct: 100 SHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG-FFFTHM 158
Query: 610 --LVVRQXNTLK 639
L+VR+ +K
Sbjct: 159 GWLLVRKHPQVK 170
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 77.8 bits (183), Expect = 1e-14
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Frame = +2
Query: 338 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPI 517
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q I
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 518 GFETIESITS--TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SC 691
+ T H T G F++H+GWL V+ + + +
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHD-QLKIQGGKLDLSDLYEDP 177
Query: 692 INVFSTGIRKHFIPIV---CFGLPTILPVILW 778
+ +F RK+++P+V CF LPT +PV+LW
Sbjct: 178 VLMFQ---RKNYLPLVGIFCFALPTFIPVVLW 206
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKW-PFSWI----RVPVLCSSNDWRYSWSSQTV 432
EIV+KN+ + + LH+ GLY AKW W+ + + + W+ +
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 433 VPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGLLLFSYR- 609
+ S N ++F Q+ W RDHR HHK++DTDADPH+ +RG + F++
Sbjct: 97 KATL--SWRVFLMLINSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRG-MFFAHMG 151
Query: 610 -LVVRQXNTLKLR 645
L+V++ + LK++
Sbjct: 152 WLLVKKHDQLKIQ 164
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 630 HPEVKKKGKLIDLSDLFDNPALMF 701
H ++K +G +DLSDL+++P LMF
Sbjct: 158 HDQLKIQGGKLDLSDLYEDPVLMF 181
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 77.8 bits (183), Expect = 1e-14
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Frame = +2
Query: 338 VVRQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQILLMVFLSLANQRPPI 517
+V Q +VG+ +L + ++GVT GAHRLW+H++YKA L ++ LM+ S+A Q I
Sbjct: 60 LVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDII 119
Query: 518 GFETIESITS--TAIRTQIHITQAVGFFYSHIGWLFVRXTP*S*EERKTNRPFGFVR*SC 691
+ T H T G F++H+GWL V+ + + +
Sbjct: 120 DWARDHRCHHKWTDTDADPHSTNR-GMFFAHMGWLLVKKHD-QLKIQGGKLDLSDLYEDP 177
Query: 692 INVFSTGIRKHFIPIV---CFGLPTILPVILW 778
+ +F RK+++P+V CF LPT +PV+LW
Sbjct: 178 VLMFQ---RKNYLPLVGIFCFALPTFIPVVLW 206
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 268 EIVYKNIFIHIYLHVTMFYGLYLCCTTAKW-PFSWI----RVPVLCSSNDWRYSWSSQTV 432
EIV+KN+ + + LH+ GLY AKW W+ + + + W+ +
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 433 VPQIIQSKITSSNPTNGLSFTGQSKTTHWVRDHRVHHKYSDTDADPHNASRGLLLFSYR- 609
+ S N ++F Q+ W RDHR HHK++DTDADPH+ +RG + F++
Sbjct: 97 KATL--SWRVFLMLINSIAF--QNDIIDWARDHRCHHKWTDTDADPHSTNRG-MFFAHMG 151
Query: 610 -LVVRQXNTLKLR 645
L+V++ + LK++
Sbjct: 152 WLLVKKHDQLKIQ 164
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 630 HPEVKKKGKLIDLSDLFDNPALMF 701
H ++K +G +DLSDL+++P LMF
Sbjct: 158 HDQLKIQGGKLDLSDLYEDPVLMF 181
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 346 TAKWPFSWIRVPVLCSSNDWRYSWSSQTVVPQIIQSKITSSNPTNGLSFTGQSKTTHWVR 525
TA + S+ PV+ ++ D SWS+ + PQ + +K T+S GL G +TT ++
Sbjct: 718 TASFAESFAMPPVVGNTTDAENSWST-SAKPQEVGAKRTTSESKLGL-HGGSDRTTAELK 775
Query: 526 DHRVHHKYSDTDAD 567
+ V SD ++D
Sbjct: 776 EESVAFSESDEESD 789
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 642 KKKGKLIDLSDLFDNPALMFSAQVFENISS 731
KK +++D++DLFDNP L + +N+++
Sbjct: 6592 KKTDRIVDVNDLFDNPTLQEFTKFVKNLTT 6621
>U28731-9|AAA68301.2| 437|Caenorhabditis elegans Hypothetical
protein F12A10.8 protein.
Length = 437
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 849 TVESLINRISMMVRFPGDYLTIPSHNITGSIVGSPKQTIGMKCFRIPVLKTLMQDYRTNP 670
T++ INR S +R IP N TG+ +G T+ + + KT ++Y+ NP
Sbjct: 189 TLDQSINRFSSRLRRIDSIRPIPLQNHTGTTIG----TVEKALVAVALAKTKSEEYQKNP 244
>Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical
protein T06E6.6 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 311 LQCFMAYIFVV-----RQRSGPSVGFAYLCYVAATIGVTAGAHRLWSHKSYKARLPLQIL 475
+ CF+ Y++++ + + FA++C+ + GV+ + LW++K Y+ + ++
Sbjct: 244 ITCFIPYLYIMICCYLNYHNQSANNFAFICF--SCHGVSGASIFLWTYKPYRKVVNAKLR 301
Query: 476 LMVFLSLANQRPPI 517
++ +QRP +
Sbjct: 302 ELISFMHCSQRPVV 315
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical protein
Y76A2B.1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASRGL 591
+ H HH++ + + P +SR +
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSRNM 1012
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASRGL 591
+ H HH++ + + P +SR +
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSRNM 1012
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 343 TTAKWPFSWIRVPVLCSSN-DWRYSWSSQTVVPQIIQSKI-TSSNPTNGLSFTGQSKTTH 516
T KW PV S D +S + + + S++ +SS+ TN + T + TH
Sbjct: 925 TGTKWMLGEQAAPVFRSLKPDGVFSSIPRAITASVRHSEMPSSSSTTNSAAQTPSTSVTH 984
Query: 517 WVRD---HRVHHKYSDTDADPHNASRGL 591
+ H HH++ + + P +SR +
Sbjct: 985 STTEKHHHHQHHQHQEPTSVPTPSSRNM 1012
>Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical
protein F56H9.1 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 482 VFLSLANQRPPIGFETIESITSTAIRTQIHITQAVGFFYSHIGWL 616
+ ++LAN R PIGFE I ST QI I G F IG+L
Sbjct: 155 IIINLANCRVPIGFEHI-GYYSTPCNNQITIIVVSGIFL--IGFL 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,818,101
Number of Sequences: 27780
Number of extensions: 492058
Number of successful extensions: 1238
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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