Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30581.Seq
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 169 5e-41
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 165 7e-40
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 155 5e-37
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 132 4e-30
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 126 3e-28
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 124 1e-27
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 122 7e-27
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 117 1e-25
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 109 5e-23
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 106 3e-22
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 99 7e-20
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 95 9e-19
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 94 2e-18
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 77 3e-13
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 66 5e-10
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 59 7e-08
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 59 7e-08
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 40 0.027
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 40 0.027
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 39 0.062
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 38 0.14
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 38 0.19
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 37 0.33
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 37 0.33
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 37 0.33
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 0.58
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q2GPJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 3.1
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 4.1
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 33 4.1
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 33 4.1
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 33 5.4
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 5.4
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 33 5.4
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 7.1
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_Q1E7R8 Cluster: Predicted protein; n=1; Coccidioides im... 32 7.1
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 32 9.4
UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoar... 32 9.4
UniRef50_Q4N4M4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 169 bits (410), Expect = 5e-41
Identities = 87/156 (55%), Positives = 102/156 (65%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MKLN+S+PATG +++ + K +G +
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P + G RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+Y
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 165 bits (400), Expect = 7e-40
Identities = 83/156 (53%), Positives = 99/156 (63%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MKLN+SYP TG +++ + K +G +
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P + G RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q+
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQD 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+Y
Sbjct: 121 IPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQY 156
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 155 bits (377), Expect = 5e-37
Identities = 81/156 (51%), Positives = 97/156 (62%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MKLNVS+PATG + + + K +G +
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P + G RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+Y
Sbjct: 121 IPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQY 156
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 132 bits (320), Expect = 4e-30
Identities = 71/159 (44%), Positives = 86/159 (54%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MK N+SYP TG + V + S K +G +
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P G K RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA E
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANE 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYSSN 517
I GLTD NVPRRLGPKR +K+R+LF K D V N
Sbjct: 121 IAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKN 159
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 126 bits (304), Expect = 3e-28
Identities = 68/156 (43%), Positives = 85/156 (54%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MKLN+S P + + + + + K G +
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P G RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG E
Sbjct: 102 FPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNE 161
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
IPGLTD V ++LGPKRA+KIRKLFNL K DDVR+Y
Sbjct: 162 IPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKY 197
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 124 bits (299), Expect = 1e-27
Identities = 66/152 (43%), Positives = 86/152 (56%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MK N+SYP TG + + + + + K +G +
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P + G + RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG E
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAE 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD 496
I GLT +PR+LGPKRA+ I+KLF L KEDD
Sbjct: 121 IDGLTTVTLPRKLGPKRANNIKKLFGLKKEDD 152
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 122 bits (293), Expect = 7e-27
Identities = 58/91 (63%), Positives = 69/91 (75%)
Frame = +2
Query: 227 DETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 406
D+ G K RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI
Sbjct: 68 DKQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIA 127
Query: 407 GLTDGNVPRRLGPKRASKIRKLFNLSKEDDV 499
GLTD NVPRRLGPKR +K+R+LF K D V
Sbjct: 128 GLTDQNVPRRLGPKRLTKLRRLFGFKKADRV 158
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 117 bits (282), Expect = 1e-25
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +3
Query: 75 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTN 251
CQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTH 70
Score = 68.9 bits (161), Expect = 7e-11
Identities = 58/160 (36%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MKLNVSYPATG ++ + K +E W+ Q R
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEK---------RMGQVVEADILGDEWKGYQLR 51
Query: 221 IP---DETGRPDKQRV----RL-LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 376
I D+ G P KQ V RL L+ K HSC+ PR + RK K+VR V+AN+S L LV
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLV 111
Query: 377 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD 496
+++K P RLGP R+S I K++ L +EDD
Sbjct: 112 VLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD 141
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 109 bits (261), Expect = 5e-23
Identities = 60/155 (38%), Positives = 85/155 (54%)
Frame = +2
Query: 44 KLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQARI 223
K+NV+YPATG + L K +G +
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 224 PDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 403
P TG RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEI 120
Query: 404 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
G+T+ +P R GP+RAS RKLFNLS++DDV+++
Sbjct: 121 EGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKF 155
Score = 71.7 bits (168), Expect = 9e-12
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +3
Query: 81 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 254
K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GFPM GV TN+
Sbjct: 13 KKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNN 70
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 106 bits (255), Expect = 3e-22
Identities = 57/148 (38%), Positives = 80/148 (54%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
M++ ++YP G VV A + L K +G +
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
P + G +R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +E
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKE 120
Query: 401 IPGLTDGNVPRRLGPKRASKIRKLFNLS 484
I GLT VPRR GPKRAS +R +F ++
Sbjct: 121 IDGLTTTAVPRRFGPKRASTLRAMFGIT 148
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 98.7 bits (235), Expect = 7e-20
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +2
Query: 251 QRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 430
QR RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP
Sbjct: 77 QRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVP 136
Query: 431 RRLGPKRASKIRKLFNL 481
+RL PKRASKIR+LF L
Sbjct: 137 KRLVPKRASKIRRLFGL 153
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +3
Query: 81 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVL 245
K + D K + + RM +E + LG+E+ G R+ GGND QGFPM QGVL
Sbjct: 20 KSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVL 74
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 95.1 bits (226), Expect = 9e-19
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +3
Query: 75 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTN 251
CQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+
Sbjct: 12 CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTH 70
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 395 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYS 511
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + S
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNS 118
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 94.3 bits (224), Expect = 2e-18
Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXX-MEGLCTSCRWRQRQA 217
MKLN++YP G + L+ +G R +
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 218 RIPDETGRPDKQRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKG 391
P G RV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 392 AQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+Y
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKY 159
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 KLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 254
K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK GFPM GVL +S
Sbjct: 14 KQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASS 72
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 76.6 bits (180), Expect = 3e-13
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +2
Query: 224 PDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 403
P +G K+RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI
Sbjct: 47 PMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEI 106
Query: 404 PGLTDGNVPRRLGPKRASKIRKLFNLSKED 493
GLT+ P++ K+RK+F + E+
Sbjct: 107 DGLTNAVNDVSHLPRKEKKLRKMFGVPDEE 136
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/55 (38%), Positives = 39/55 (70%)
Frame = +3
Query: 84 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 248
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLT 54
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 66.1 bits (154), Expect = 5e-10
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Frame = +2
Query: 41 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 220
MK N++ P+TG+ + + L K + Q +
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 221 IPDETGRPDKQRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 394
P + G RV++L+ KG + R + GER RKSVRGCIV +SVL + ++
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKN 120
Query: 395 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRY 508
++ +T+ N + L KR+S +RK+ L+K DD+R++
Sbjct: 121 DDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKH 157
Score = 63.3 bits (147), Expect = 3e-09
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 78 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 254
Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQGFPMK+G+L+ S
Sbjct: 13 QHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPS 71
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 58.8 bits (136), Expect = 7e-08
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 254 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 433
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 434 RLGPKRASKIRKLFNLSKEDD 496
RLGP R+S I K++ L +EDD
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 58.8 bits (136), Expect = 7e-08
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 75 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 179
CQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.3 bits (90), Expect = 0.027
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGV 242
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDI 188
Score = 33.5 bits (73), Expect = 3.1
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 352
++GL R ++ P P + R L+S G + PR GER+RK+VRG +
Sbjct: 166 LKGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISE 224
Query: 353 NLSVLALVIVRK 388
++ + IV++
Sbjct: 225 DIVQINTKIVKQ 236
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 40.3 bits (90), Expect = 0.027
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 132 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
++G E LG KGY LR+ GG+DK GFPMK+ V
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDV 64
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 39.1 bits (87), Expect = 0.062
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 242 PDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 391
P R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 68 PGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 239 RPD---KQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 382
RPD +RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 75 RPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 37.5 bits (83), Expect = 0.19
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = +2
Query: 239 RPD---KQRVRLLMSKGHSCYRPRRDGERKRKSVRG 337
RPD +RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 75 RPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 36.7 bits (81), Expect = 0.33
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 RVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 430
RV LL++ HS Y+P R E S++ V +S+L +VI+ G ++IPG T P
Sbjct: 61 RVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWAP 119
Query: 431 RR 436
+R
Sbjct: 120 KR 121
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 36.7 bits (81), Expect = 0.33
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 329 LIYVFSLHRGAVCNMSGPLTSEDEHA-VCQDALFHRESLLVVAASDTKYIALPFI 168
L F+L + L E EH V Q AL H E+LLVV D + ++LPF+
Sbjct: 157 LASAFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 36.7 bits (81), Expect = 0.33
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 346
M GL R IP G P R ++L++ G + PR GER+RKSVRG ++
Sbjct: 153 MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 0.58
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 123 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
Y K++G ++ ++G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 34.7 bits (76), Expect = 1.3
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 371 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYSSN 517
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y N
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYLQN 540
>UniRef50_Q2GPJ6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1112
Score = 33.5 bits (73), Expect = 3.1
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 515 LTNNDVHHLLC*G*TAYGF---WKH-VWDLDGGVHFHQSIQEFPGHPCAQ*QEPRPRDWR 348
LT N +H L G T YG WK V L+ V H+ I + Q +D
Sbjct: 747 LTQNQIHQALAFGGTRYGSLATWKDSVEYLETRVKIHEMIIDLSKGLLEQTPSSASQDPT 806
Query: 347 QQYIHELIYVFSLH 306
Q+IHE + F LH
Sbjct: 807 YQFIHETVREFFLH 820
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 3.1
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 84 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSV 257
L EV D+ K RI+YE A ++ GD K YV+ V G D G +K V+ +V
Sbjct: 455 LKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTGKNLKTQVIQENV 509
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 246 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 148
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 33.1 bits (72), Expect = 4.1
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 242 PDKQRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 382
P + R+L+S G + PR GER+RK+VRG + ++ + VIV
Sbjct: 167 PGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 227 DETGRPDKQRV-----RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 391
D+ GRP ++ V ++ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 392 AQEIPGL 412
+ + L
Sbjct: 117 EEPVAEL 123
Score = 32.3 bits (70), Expect = 7.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 96 VDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
VD F + +GA V+ +G + GY + + GG+D G PM++ V
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDV 67
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 32.7 bits (71), Expect = 5.4
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Frame = +2
Query: 218 RIPDETG----RPDK--QRVRLLM--SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 373
R+P+E G RPD Q V+ + GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 374 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 472
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 32.7 bits (71), Expect = 5.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 99 DEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 248
D+ + +++G +E LG+++ + GG+DKQGF +K+ + T
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNT 68
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 5.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 320 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 490
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 135 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 242
+G+E +A LG E K +R+ GG+DK G PM+ V
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDV 71
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 93 VVDEHKLRIFYEKRMGAEVEADQLGDEW 176
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 173 MEGLCTSCRWRQRQARIPDETGRPDKQRVRLLMSKGHSC 289
+ G C +CR R+ + +P + GRP+ R +S GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGR---CISSGHTC 41
>UniRef50_Q1E7R8 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 171
Score = 32.3 bits (70), Expect = 7.1
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = -1
Query: 462 ILEARLGPRRRGTFPSVNPGISWA---PLRTITRAKTERLASTIHPRTDLRFLSPSRRGL 292
I + ++ + G F +V +W P R R + LA + DL + G
Sbjct: 22 IAQTKIKDQGPGLFRAVIARKTWRVRRPGRQCKRDVEQALAPLAETKHDLGIVWDDMSGW 81
Query: 291 *HEWPFDIRRRTRCLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRY 115
W F +RR L G P G LACR ++ S +H + ++ A R+RY
Sbjct: 82 -RGWKFGPKRRI--LDGVPGLRGELACRSSEQGFRASGDLHHTGSREIIPEDSARRERY 137
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 31.9 bits (69), Expect = 9.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 120 FYEKRMGAEVEADQLGDEWKGYVLRVAG 203
F E+R AEVE+ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
>UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoarcus
anaerobius|Rep: Putative regulatory protein - Azoarcus
anaerobius
Length = 661
Score = 31.9 bits (69), Expect = 9.4
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 266 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 445
++ GH YR R +R+ D ++ + L ++R +E G D V R+LG
Sbjct: 582 IIKPGHLAYRMRDRRTPERQHAAASSRDQSIPAIQLDLIRSAIEEFNGNVD-LVGRKLGL 640
Query: 446 KRASKIRKL 472
RA+ R++
Sbjct: 641 SRATVYRRM 649
>UniRef50_Q4N4M4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 342
Score = 31.9 bits (69), Expect = 9.4
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 326 IYVFSLHRGAVCNMSGPLTSEDEHAVCQDALFHRESLLVVAASDTKYIALPFI 168
I +F R VC S +EH + Q FH E + V + KY+ LP+I
Sbjct: 291 IVIFCKDRYFVCRRENGKRSREEHKLTQ---FHHEIINSVVKNIVKYLPLPYI 340
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,861,649
Number of Sequences: 1657284
Number of extensions: 12116463
Number of successful extensions: 34560
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 33481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34526
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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