Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30580.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 144 ILTMLVVSLSINITFIPGPLSXXILVMYILTACI 43
           IL  L  +      FI GP+   + ++Y L +C+
Sbjct: 281 ILAQLWATWDPQSPFIDGPVFVILTLLYSLNSCV 314


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 114 INITFIPGPLSXXILVMYILTACITFI 34
           INIT +P      ILV+ I     T I
Sbjct: 368 INITTVPSEQQWGILVLIIAPLIATLI 394


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -1

Query: 148 HHTHYAGSFFIH*YHFHSRAAXXPHFSNVHFNCLY 44
           H T+ + +++ +     +     PH+SN H+   Y
Sbjct: 14  HGTYPSDNYYNYTSDIPNAQQMPPHYSNYHYEDPY 48


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 62  TF*LLVSHSF*LNYPYLFH 6
           TF LLV  S+ + Y + FH
Sbjct: 262 TFILLVGDSYIVMYVFFFH 280


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -1

Query: 148 HHTHYAGSFFIH*YHFHSRAAXXPHFSNVHFNCLY 44
           H T+ + +++ +     +     PH+SN H+   Y
Sbjct: 14  HGTYPSDNYYNYTSDIPNAQQMPPHYSNYHYEDPY 48


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -1

Query: 148 HHTHYAGSFFIH*YHFHSRAAXXPHFSNVHFNCLY 44
           H T+ + +++ +     +     PH+SN H+   Y
Sbjct: 14  HGTYPSDNYYNYTSDIPNAQQMPPHYSNYHYEDPY 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,105
Number of Sequences: 336
Number of extensions: 2439
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)