Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30579.Seq
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3347| Best HMM Match : WD40 (HMM E-Value=0.053) 58 6e-09
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 36 0.026
SB_49036| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39704| Best HMM Match : 7tm_2 (HMM E-Value=7e-12) 31 0.75
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 30 1.7
SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21) 29 4.0
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 29 5.3
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 29 5.3
SB_27472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45) 28 7.0
SB_21111| Best HMM Match : WD40 (HMM E-Value=0.0047) 28 9.2
>SB_3347| Best HMM Match : WD40 (HMM E-Value=0.053)
Length = 321
Score = 58.4 bits (135), Expect = 6e-09
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQSV 172
F +G++ + +T DGRLK+WD LK +YTP HL++ CL+W S++V
Sbjct: 10 FDNNGRFLALLTPDGRLKVWDCTNGSLKNQYTPSSHLSTTCACLKWCNSSRNV 62
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 325 SAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSVKQTYNISIENNTK 465
S+KV ++WSR LYSC+ D + EW E K+ I +E K
Sbjct: 67 SSKVNDVEWSRNGELYSCSSDKYIVEWCTEKAEHKR--YIELETKAK 111
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 316 KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQTYNISIENNT 462
K + + AL + + G LYS +DS + WN+ + +K Y +S+E++T
Sbjct: 27 KRHRSGINALQYDKSNGRLYSAGRDSIIRCWNVRNERIKDPYMVSLEHHT 76
>SB_49036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 35.1 bits (77), Expect = 0.061
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +1
Query: 304 WVPAK--HFSAKVTALDWS---RKYGLYSCTKDSRVYEWNIEDGSVKQTYNIS 447
W P++ +S+KV +L WS +Y L++C D W I S QT++++
Sbjct: 301 WKPSEVQAYSSKVLSLLWSLGQHQYNLFTCGPDGNTMWWRIRPDSTDQTFHLA 353
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQSV 172
FS++GK ++ D +LK+WD E+ L T P C W V ++
Sbjct: 1272 FSKNGKRLVSVALDKKLKVWDVESGNLLDTLTGH---DGYPVCCAWNPVDNTM 1321
>SB_39704| Best HMM Match : 7tm_2 (HMM E-Value=7e-12)
Length = 873
Score = 31.5 bits (68), Expect = 0.75
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 379 TKDSRVYEWNIEDGSVKQTYNISIENNTKQGSNI 480
+K + WN E+ S+ +++S NN+K G+++
Sbjct: 381 SKSIEIVSWNFEEWSIAVVFDVSAVNNSKNGTSL 414
>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 31.1 bits (67), Expect = 0.99
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 109
+ FSED +Y T + D ++W+ E + +EY+
Sbjct: 246 DCAFSEDSQYLVTASSDNLARLWNVEAGEVVREYS 280
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTET 85
+S DG Y +T DG++K+W+T T
Sbjct: 1259 YSPDGNYIATGGDDGKVKLWNTMT 1282
>SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = -2
Query: 504 VWYNF--YGVYIAPLLRIIF----NRNIIGLFN*TIFYVPLIDSTVLSTAVQTVFSTPIQ 343
+W N Y +Y+ PL + N N I FN +I T+ + TV IQ
Sbjct: 654 LWLNLFIYLMYLMPLTVLAVHSKQNENTICNFNSSISKSEYSGKTLPCDSKDTV----IQ 709
Query: 342 GGHFSAKMFGGHPNIYYFRLTY*VY*QFTIVVPNTMHWDSFSFVLAF 202
HFS + + F Y Q+ + +PN M W ++ F F
Sbjct: 710 VMHFSVMLMTAFMCLREFMQMYNNRLQYFLYMPNYMEWTAYIFTFLF 756
>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 109
FS +GKY T D LK+WD + YT
Sbjct: 130 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 161
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 8 AMFSEDGKYYSTITKDGRLKIWDTETNVLKQE 103
A FS DG+Y T + DG +++W+ T ++++
Sbjct: 220 AAFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD 251
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 106
FS DG+Y ++ + D R+ IW T+T L +
Sbjct: 341 FSPDGRYLASGSFDKRVHIWSTQTGNLVHSF 371
>SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21)
Length = 759
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 109
+ F+ DG + + D +K+WDTET YT
Sbjct: 138 DVSFNNDGTQFLSAGYDRYVKLWDTETGECLGRYT 172
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 35 YSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQSV 172
+ + ++DG + +WDT + S P CL W+ + S+
Sbjct: 145 FLSASRDGSVVLWDTRKPRPAKRLADPTQYDSIPCCLDWSPLDSSI 190
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 316 KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 411
K + KV + WS+ + SC D VYEWN+
Sbjct: 271 KGHNGKVRQVIWSQDDSKIISCGMDGAVYEWNV 303
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 23 DGKYYSTITKDGRLKIWDTE 82
D KY++T KDG L +W T+
Sbjct: 779 DDKYFATCAKDGVLHLWTTD 798
>SB_27472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWDTETNVL 94
FS DG Y + DG+L IWD ++ L
Sbjct: 10 FSPDGSYVISGDADGKLNIWDWKSTKL 36
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 11 MFSEDGKYYSTITKDGRLKIWDTETNV 91
+F KY T +DG +K+WD NV
Sbjct: 191 LFFNPLKYLITAARDGSIKVWDDTGNV 217
>SB_27746| Best HMM Match : MAM (HMM E-Value=1.4013e-45)
Length = 622
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -2
Query: 642 TDK*QNSGLRSTVS*ALESMSHLYCEASKD*ADMMQLLSTGIS------CAIVWYNFYGV 481
T+K S ST+S + S+LY EAS D L +G+ C WY+ YG
Sbjct: 354 TEKTGPSNDHSTLS---DKGSYLYIEASGHKQDEAARLVSGVLDANETVCLQFWYHMYGR 410
Query: 480 YIAPLLRIIFNRN 442
+I LR+I N
Sbjct: 411 HIGS-LRVIITSN 422
>SB_21111| Best HMM Match : WD40 (HMM E-Value=0.0047)
Length = 96
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 17 SEDGKYYSTITKDGRLKIWDTE 82
S+D Y++T + DG +K+WD +
Sbjct: 56 SQDLMYFATASDDGTVKLWDLQ 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,919,018
Number of Sequences: 59808
Number of extensions: 463340
Number of successful extensions: 1082
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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