Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30578.Seq
(533 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 144 5e-35
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 144 5e-35
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 42 7e-04
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 42 7e-04
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 42 7e-04
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 42 7e-04
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 42 7e-04
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 40 0.003
BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p pro... 29 5.3
AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p pro... 29 5.3
AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC... 29 5.3
AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB... 29 5.3
AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA... 29 5.3
AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypept... 29 5.3
AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 28 7.0
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 9.2
BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p pro... 28 9.2
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 9.2
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 9.2
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 9.2
AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA... 28 9.2
AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB... 28 9.2
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 144 bits (350), Expect = 5e-35
Identities = 63/68 (92%), Positives = 68/68 (100%)
Frame = +3
Query: 45 HVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 224
HVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV
Sbjct: 13 HVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 72
Query: 225 QLIKNGKK 248
QLIKNGKK
Sbjct: 73 QLIKNGKK 80
Score = 89.0 bits (211), Expect = 4e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 310 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 435
VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 242 KESDPFVPRDGCLNHIEENDE 304
K+ FVPRDG LN+IEENDE
Sbjct: 79 KKITAFVPRDGSLNYIEENDE 99
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 144 bits (350), Expect = 5e-35
Identities = 63/68 (92%), Positives = 68/68 (100%)
Frame = +3
Query: 45 HVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 224
HVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV
Sbjct: 13 HVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 72
Query: 225 QLIKNGKK 248
QLIKNGKK
Sbjct: 73 QLIKNGKK 80
Score = 89.0 bits (211), Expect = 4e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 310 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 435
VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 242 KESDPFVPRDGCLNHIEENDE 304
K+ FVPRDG LN+IEENDE
Sbjct: 79 KKITAFVPRDGSLNYIEENDE 99
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 104
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKE 90
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 99 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 227
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 84
>BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p
protein.
Length = 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430
>AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p
protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 332 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 369
>AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC,
isoform C protein.
Length = 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430
>AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB,
isoform B protein.
Length = 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430
>AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA,
isoform A protein.
Length = 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430
>AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypeptide
protein.
Length = 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 450 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 334
HN++ W + + E R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430
>AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA
protein.
Length = 358
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 126 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 236
PFG + +VLE+ G K Q IRKCV + +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 154 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 53
PF PP VP++A L L R +RRW
Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943
>BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p
protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 404 RARRDTLATF-TTLKRTPGMSP---TA*PLRPNPATSIRRFLRCGLGNRHGGRMGH 249
R RD++ + T +R+ + P + L P PA+ + LR G G+ HGG GH
Sbjct: 141 RVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGH 196
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
Length = 1241
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 154 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 53
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
Length = 1241
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 154 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 53
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 154 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 53
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA,
isoform A protein.
Length = 580
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 404 RARRDTLATF-TTLKRTPGMSP---TA*PLRPNPATSIRRFLRCGLGNRHGGRMGH 249
R RD++ + T +R+ + P + L P PA+ + LR G G+ HGG GH
Sbjct: 323 RVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGH 378
>AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB,
isoform B protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 404 RARRDTLATF-TTLKRTPGMSP---TA*PLRPNPATSIRRFLRCGLGNRHGGRMGH 249
R RD++ + T +R+ + P + L P PA+ + LR G G+ HGG GH
Sbjct: 361 RVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGH 416
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,036,976
Number of Sequences: 53049
Number of extensions: 574978
Number of successful extensions: 1456
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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