Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30576.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 68 3e-10
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 66 1e-09
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 66 1e-09
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 61 2e-08
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 60 4e-08
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 57 4e-07
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 54 4e-06
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 52 1e-05
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 52 2e-05
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 52 2e-05
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 49 1e-04
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 49 1e-04
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 47 5e-04
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 47 5e-04
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 45 0.002
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 44 0.003
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 44 0.004
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 43 0.006
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 41 0.025
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 41 0.034
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 39 0.10
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 39 0.10
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 38 0.18
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q0BRV3 Cluster: Hypothetical exported protein; n=1; Gra... 35 2.2
UniRef50_Q8VXC3 Cluster: Ethylene responsive protein; n=5; Oryza... 35 2.2
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 34 2.9
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 34 2.9
UniRef50_Q1N4U1 Cluster: Sensor protein; n=1; Oceanobacter sp. R... 34 3.9
UniRef50_A2FR01 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q5KIZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q5ABB5 Cluster: Putative uncharacterized protein BUL3; ... 33 6.7
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/52 (57%), Positives = 43/52 (82%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+AADV+ +L SVGI D+++L K+I+EL GKD+ +LIA+G EKL+S+P GG
Sbjct: 18 PSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGG 69
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+A D++KIL SVGI D ++L KVI+ELNGK++E +IA G KL+S+P GG
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAGG 69
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+A D++KIL SVGI D ++L KVI+ELNGK++E +IA G KL+S+P GG
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/53 (49%), Positives = 43/53 (81%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
P+ D++KIL SVG D ++++ ++++++GKD+ +LIAAGREKL+S+P GGG
Sbjct: 18 PSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGREKLASVPAGGG 70
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/53 (47%), Positives = 42/53 (79%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
P+A +++ I+G+VG D E ++ ++ E++GKD+ +LIA+GREKL+S+P GGG
Sbjct: 18 PSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG 70
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/52 (48%), Positives = 39/52 (75%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+A D++ +L SVGI D E+L ++ EL GKD+ +LI++G +KL+S+P GG
Sbjct: 18 PSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKLASVPSGG 69
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+A DV+K+L + I D E+L +I EL GKDV ++IA G +KL+S+P GG
Sbjct: 18 PSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSGG 69
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -1
Query: 416 AADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXX 237
A ++ ILGSVGI D EKL KVI EL GKD+ ++IAA KL+S+P GG
Sbjct: 20 AKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAAD-AKLASVPSGGAVAASGGAPL 78
Query: 236 XXXXXXXXXXXXXXXXXXXXLNLTMTWASVSLTKL 132
+L TWA S T+L
Sbjct: 79 PVEPPLLLKPRRRRRRRSPRKSLMTTWALASSTRL 113
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -1
Query: 419 AAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
+A D++KIL VG+ + L KVI+ELNGK++E +IA G +L+S+P GG
Sbjct: 7 SAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
P+A DV+K+L SVG+ ++ +KL ++ L GK + +LI AG K+SS+ G G
Sbjct: 18 PSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKVSSLSAGAG 70
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 270
P + DV+KILG++ I D E+LK VI N K++E LI+ G KL SMP G
Sbjct: 15 PNSKDVKKILGNINIKADEERLK-VIGNFNSKNIEDLISQGSNKLDSMPNG 64
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 273
Y L A P A ++ IL SVGI + EK+ V++ L GK V++LI G EKL+++P
Sbjct: 7 YLLLNAAGNTPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPA 66
Query: 272 GG 267
G
Sbjct: 67 AG 68
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P+A DV K+L + G+ D E V+ L GK + ++IA G+ KLSS+P GG
Sbjct: 18 PSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGG 69
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITEL--NGKDVEQLIAAGREKLSSMPVGG 267
PA AD+EKI+ +VG TDA+ K V+ ++ G VE L++ G+++++SMP G
Sbjct: 18 PAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLGKKRMASMPAVG 71
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 273
Y LC + A V++IL + G D K+K+V +NGK+V ++I AG++++ SM V
Sbjct: 7 YILCTIGHENAEEAKVKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKKQMGSMAV 66
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
P+ DV +L SVG D + L + ++GK V + I+AG +KL ++P GGG
Sbjct: 20 PSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLDKLQTLPAGGG 72
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
P D+ K+L G+ + A +K V++ L GK++ +I G+++L+S+ VGGG
Sbjct: 18 PTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQKQLTSLSVGGG 70
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMP 276
Y L +++ P+ ADVE I +V I D L V+ + G+DV LIA G K+S+MP
Sbjct: 9 YALASLSKASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMP 67
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 273
Y L + +P P AADVE I + GI +++ L V+ + G+ V L+A G K+S++ V
Sbjct: 9 YALASLNKPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKMSAVAV 68
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
P DVEKIL S + D ++ VI + GK E++IAAG EKL+ G
Sbjct: 18 PTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSEKLAKFGSAG 69
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGKTT 424
MRY+AAYLLAVLGG TT
Sbjct: 1 MRYIAAYLLAVLGGHTT 17
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = -1
Query: 425 RPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
+P V+KIL + G+ DA +L+ V+T+++ K V++L+ G+ +++ VGG
Sbjct: 17 KPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKTEMNK--VGG 67
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 40.7 bits (91), Expect = 0.034
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLS 285
P DV ILG+VG D +KL + ++ GKD+ +++AAG E L+
Sbjct: 76 PTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 121
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -1
Query: 425 RPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
+P+ ADV+ ++ SV DA KL + + GK++E +I AG K+ + +GG
Sbjct: 39 QPSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGLSKVGN--IGG 89
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREK 291
Y LC + A V++IL + G D K+K+V +NGK+V ++I R K
Sbjct: 7 YILCTIGHEHAEEAKVKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERNK 60
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 38.3 bits (85), Expect = 0.18
Identities = 30/105 (28%), Positives = 49/105 (46%)
Frame = -1
Query: 581 DFGSIKPTTIRQQWRFVQDERYSFALHVSCQLGLKKCVTWPRIYWLCWVARPRPAAADVE 402
D S+ P Q + V + Y + +S G + + + + P A DVE
Sbjct: 48 DLTSLLPLKRAIQAKAVDETFYKYLKRLS--KGTQNLLIFKLNKQAAYAGTPSLAEEDVE 105
Query: 401 KILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 267
LG++ + +AE +KKVI L GK+ E +GR++ SS+ G
Sbjct: 106 SPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 36.3 bits (80), Expect = 0.72
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREK 291
P DV ILG+VG D +KL + ++ GKD+ +++AA RE+
Sbjct: 18 PTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA-RER 60
>UniRef50_Q0BRV3 Cluster: Hypothetical exported protein; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
exported protein - Granulobacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1)
Length = 161
Score = 34.7 bits (76), Expect = 2.2
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 241 SCSSRAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAA 420
SCS+ GA ID + RP A+S ++ LP++ V + SA+ + + T AA
Sbjct: 33 SCSASIGAQVVGMIDAATGRPVALSSASPLPVAGVAVSATGSAAASSSITAGSYQTVFAA 92
Query: 421 G---RGLATQH 444
G RG + Q+
Sbjct: 93 GSITRGCSVQN 103
>UniRef50_Q8VXC3 Cluster: Ethylene responsive protein; n=5; Oryza
sativa|Rep: Ethylene responsive protein - Oryza sativa
(Rice)
Length = 326
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 280 IDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAAGRGLATQHSQ 450
+ D A+SC +S P S + SFS+ V+ + PR +AAAGR A++ S+
Sbjct: 66 LSDDGDESLAVSCVSS-PKSKAVPSFSFSSDVSSSSRPRRRVAAAAAGRRKASKKSK 121
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSM 279
P ++KIL S+G +AE L KVI + N K+ E++I KL+SM
Sbjct: 18 PNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESSKLASM 64
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVI 345
P + D++KIL SVGI TD E+L KV+
Sbjct: 18 PTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_Q1N4U1 Cluster: Sensor protein; n=1; Oceanobacter sp.
RED65|Rep: Sensor protein - Oceanobacter sp. RED65
Length = 1120
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 440 WV-ARPRPAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSM 279
WV AR P + +K+LG +G+ D K VI +LN ++ LI +KLS +
Sbjct: 454 WVQARKMPLKSINDKVLGVLGVYQDITDYKSVIEQLNSQN--SLINESNQKLSQL 506
>UniRef50_A2FR01 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 220
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 673 DHRHVCGYPRFWPIIPTDLVNREIPHFRW-FMILVLLNQLPYASNGGLFKTNVILSHYTF 497
++ H+ +P F+P++ DL N EIPH W F L+ ++ L + G + + + F
Sbjct: 34 NNAHIPNFPSFYPVVYVDL-NAEIPHNFWSFFKLMYVSALSFT---GACIFQIFVQFFGF 89
Query: 496 RVN 488
+N
Sbjct: 90 AIN 92
>UniRef50_Q5KIZ9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 865
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 298 RPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAAGRGLATQHSQ 450
RP+ S S S + ++ TFLSFSA+ T+P + A L H+Q
Sbjct: 515 RPSNQSNSRSAAVQTIATFLSFSANDTLPVVQEVAVAFIARQEALMGMHNQ 565
>UniRef50_Q5ABB5 Cluster: Putative uncharacterized protein BUL3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein BUL3 - Candida albicans (Yeast)
Length = 813
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 310 ISCSTSL-PLSSVITFLSFSASVTIPTEPRIFSTSAAAGRGLATQHS 447
+S + SL P+SS +F +A+ ++PT P FS AA G A+ H+
Sbjct: 454 VSSAGSLRPISSSNSFNQLTATHSLPTSPSSFSVRAALQEGAASTHA 500
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,758,318
Number of Sequences: 1657284
Number of extensions: 10784220
Number of successful extensions: 29938
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29918
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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