Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30576.Seq
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 76 5e-14
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 76 5e-14
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 76 5e-14
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 75 7e-14
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 75 7e-14
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 31 1.5
BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p pro... 31 2.0
AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA... 31 2.0
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 30 2.6
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 30 2.6
AY094852-1|AAM11205.1| 638|Drosophila melanogaster RE12569p pro... 30 3.5
AE013599-2714|AAF57677.1| 638|Drosophila melanogaster CG10924-P... 30 3.5
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 29 6.1
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 29 6.1
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 29 6.1
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
PA +D+EKIL SVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 18 PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGK 430
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
PA +D+EKIL SVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 18 PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGK 430
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
PA +D+EKIL SVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 18 PANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGK 430
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 75.4 bits (177), Expect = 7e-14
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
PA D+EKIL SVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 18 PANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGK 430
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 75.4 bits (177), Expect = 7e-14
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = -1
Query: 422 PAAADVEKILGSVGIVTDAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 264
PA D+EKIL SVG+ DAE+L KVI EL GK ++ LI GREKLSSMPVGGG
Sbjct: 18 PANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGGG 70
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 474 MRYVAAYLLAVLGGK 430
MRYVAAYLLAVLGGK
Sbjct: 1 MRYVAAYLLAVLGGK 15
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.5
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +1
Query: 247 SSRAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAAGR 426
SS A P + I S P++ S S S+ S +F S SAS + PT T+AAAG
Sbjct: 135 SSTGTASPNSSIQ---SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGA 191
Query: 427 GLATQH 444
+ H
Sbjct: 192 LAGSPH 197
>BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p
protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 509 ALHVSCQLGLKKCVTWPRIYWLCWVARP--RPAAADVEKILGSVGI 378
AL +C LGL+ C+T + W+A+P RP ADV + + GI
Sbjct: 785 ALSAACSLGLESCLTEAGEQFNAWLAKPEDRP-KADVRETVYYYGI 829
>AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA
protein.
Length = 988
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 509 ALHVSCQLGLKKCVTWPRIYWLCWVARP--RPAAADVEKILGSVGI 378
AL +C LGL+ C+T + W+A+P RP ADV + + GI
Sbjct: 779 ALSAACSLGLESCLTEAGEQFNAWLAKPEDRP-KADVRETVYYYGI 823
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +1
Query: 247 SSRAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAAG 423
SS A P + I S P++ S S S+ S +F S SAS + PT T+AAAG
Sbjct: 135 SSTGTASPNSSIQ---SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAG 190
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +1
Query: 247 SSRAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAAG 423
SS A P + I S P++ S S S+ S +F S SAS + PT T+AAAG
Sbjct: 135 SSTGTASPNSSIQ---SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAG 190
>AY094852-1|AAM11205.1| 638|Drosophila melanogaster RE12569p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITE 339
Y CW+AR PA DV ++ G I TD+++ +TE
Sbjct: 88 YENCWLARTNPA--DVARVEGKTFISTDSKEQTVPVTE 123
>AE013599-2714|AAF57677.1| 638|Drosophila melanogaster CG10924-PA
protein.
Length = 638
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 452 YWLCWVARPRPAAADVEKILGSVGIVTDAEKLKKVITE 339
Y CW+AR PA DV ++ G I TD+++ +TE
Sbjct: 88 YENCWLARTNPA--DVARVEGKTFISTDSKEQTVPVTE 123
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 265 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAA 420
PPP GI++ + + + LPL+ + T + S+S T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 265 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAA 420
PPP GI++ + + + LPL+ + T + S+S T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 265 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASVTIPTEPRIFSTSAAA 420
PPP GI++ + + + LPL+ + T + S+S T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,717,503
Number of Sequences: 53049
Number of extensions: 491731
Number of successful extensions: 1369
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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