Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30563.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;... 43 0.006
UniRef50_Q2U2J5 Cluster: Predicted protein; n=1; Aspergillus ory... 42 0.019
UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gamb... 37 0.55
UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2; Catarrhini... 36 0.72
UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protei... 36 0.72
UniRef50_UPI0000E23714 Cluster: PREDICTED: hypothetical protein,... 36 0.96
UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intro... 36 1.3
UniRef50_Q7SB65 Cluster: Putative uncharacterized protein NCU062... 36 1.3
UniRef50_Q4X874 Cluster: Pc-fam-2 protein, putative; n=1; Plasmo... 35 1.7
UniRef50_A7SVP8 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.7
UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protei... 35 1.7
UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xeno... 35 2.2
UniRef50_Q0AS26 Cluster: Pseudouridine synthase; n=1; Maricaulis... 35 2.2
UniRef50_Q2GSB9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_UPI000023F071 Cluster: hypothetical protein FG07834.1; ... 34 2.9
UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|R... 34 2.9
UniRef50_Q0LL43 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_UPI00006CCC7B Cluster: hypothetical protein TTHERM_0033... 34 3.9
UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -... 34 3.9
UniRef50_Q5KZ95 Cluster: Putative uncharacterized protein GK1706... 34 3.9
UniRef50_A6C5H6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aed... 34 3.9
UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein, pu... 33 5.1
UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1 RNA-b... 33 5.1
UniRef50_Q7YR37 Cluster: ATP-binding cassette sub-family F membe... 33 5.1
UniRef50_Q8NE71 Cluster: ATP-binding cassette sub-family F membe... 33 5.1
UniRef50_A5DE38 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A5JZQ4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q2KFA9 Cluster: Putative uncharacterized protein; n=5; ... 33 8.9
>UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG4170-PA - Nasonia vitripennis
Length = 437
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 220
MEN+Y + V N+++L LD++ DPL+ LK REQ
Sbjct: 1 MENTYSITVTNKFSLALDEDEDPLEILKLREQ 32
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 629 GSFDNRGXT*FDRRSGSDKTGV 694
G FDNRG FDR+SGSDKTG+
Sbjct: 205 GGFDNRGKREFDRQSGSDKTGI 226
>UniRef50_Q2U2J5 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 321
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +1
Query: 205 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQ 351
KS +AG+G +K ++++K + KP+PKP K +T +K K+T+ ++ Q
Sbjct: 83 KSTKAGKGTKKTTKKAKKSSTAKPKPKPRKQLT-EKQKEAKKTRELRDQ 130
>UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000009724 - Anopheles gambiae
str. PEST
Length = 445
Score = 36.7 bits (81), Expect = 0.55
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 MEN-SYGVGVVNRYALFL--DDETDPLDALKAREQ 220
MEN SYG+ V NRY LF DDE DP++A+ +Q
Sbjct: 1 MENTSYGINVANRYDLFCIDDDEGDPIEAILKSKQ 35
>UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2;
Catarrhini|Rep: Isoform 2 of Q5JVS0 - Homo sapiens
(Human)
Length = 308
Score = 36.3 bits (80), Expect = 0.72
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 220
M+ S+G V NR+ LDDE+DP D L+ E+
Sbjct: 16 MQESFGCVVANRFHQLLDDESDPFDILREAER 47
>UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protein
4; n=14; Eutheria|Rep: Intracellular hyaluronan-binding
protein 4 - Homo sapiens (Human)
Length = 413
Score = 36.3 bits (80), Expect = 0.72
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 220
M+ S+G V NR+ LDDE+DP D L+ E+
Sbjct: 16 MQESFGCVVANRFHQLLDDESDPFDILREAER 47
>UniRef50_UPI0000E23714 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 193
Score = 35.9 bits (79), Expect = 0.96
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 220 GEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGK 384
GEG ++E++R RKE + K E K K + +E + K ++ K E++K K
Sbjct: 63 GEGEEEEERRGRKEGEKKEEKKEEKRRKKKEERKKEERKEKKKEEKKKEEKKKEK 117
>UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intronic
gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to vasa intronic gene CG4170-PA,
isoform A - Apis mellifera
Length = 414
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 614 GTARAGSFDNRGXT*FDRRSGSDKTGV 694
G+ G +D RG FDR+SGSDKTG+
Sbjct: 174 GSRGRGGYDYRGKREFDRQSGSDKTGI 200
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKARE 217
MEN Y + V N+++L L D+ DP + L+ E
Sbjct: 1 MENMYSIAVTNKFSLALGDDEDPHEKLREEE 31
>UniRef50_Q7SB65 Cluster: Putative uncharacterized protein
NCU06276.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU06276.1 - Neurospora crassa
Length = 856
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 214 RAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGK 384
+ G G + + KP+PKP + +++ T + IK + +D KS Q++G+
Sbjct: 274 QCGTGGVPSVASGKSKVAPKPKPKPRRDISLSTVESIKSSTGAMGRDGKSSNQEQGE 330
>UniRef50_Q4X874 Cluster: Pc-fam-2 protein, putative; n=1;
Plasmodium chabaudi|Rep: Pc-fam-2 protein, putative -
Plasmodium chabaudi
Length = 668
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 268 GKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQK 378
GKP P PA+ V P+ K+ Q Q KSG+Q K
Sbjct: 139 GKPTPPPAQPVPTPSGSSQKKVQGQSGQQGKSGQQGK 175
>UniRef50_A7SVP8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 489
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 217 AGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQ 372
A +KE ++ RK+++GKP+P+ K PTRK +K+ +S D + EQ
Sbjct: 293 ATSNEKKEQEKERKKSEGKPKPRSEK-EKQPTRKRVKK---FESSDEEEDEQ 340
>UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protein
4; n=2; Gallus gallus|Rep: Intracellular
hyaluronan-binding protein 4 - Gallus gallus (Chicken)
Length = 357
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 220
ME S+ V NR+ LDDE+DP D L+ E+
Sbjct: 14 MEGSFSCTVANRFYQLLDDESDPFDNLREAER 45
>UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xenopus
tropicalis|Rep: Hyaluronan binding protein 4 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 339
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDAL 205
M++++G V NR+ LDDE+DPLD L
Sbjct: 1 MQDNFGCAVENRFNQLLDDESDPLDFL 27
>UniRef50_Q0AS26 Cluster: Pseudouridine synthase; n=1; Maricaulis
maris MCS10|Rep: Pseudouridine synthase - Maricaulis
maris (strain MCS10)
Length = 372
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 202 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKG 381
++ AR G + R+R+ GKP KPA G P R ++ + ++G +K
Sbjct: 299 IEDARKGRPLDAKSTRARRGKDGKPTAKPAAGRAAP-RATTSRSETPRPDTPRTGGPRKP 357
Query: 382 KGP 390
GP
Sbjct: 358 GGP 360
>UniRef50_Q2GSB9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 635
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 214 RAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 393
R E KE++ +KE + + E K K R K +N KS+D SGE++ G P+
Sbjct: 468 REAEKKAKEEEEKKKEEEEEKEKKKEKKGGKKKRASKKSKKN-KSKDAGSGEEESGSEPS 526
>UniRef50_UPI000023F071 Cluster: hypothetical protein FG07834.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07834.1 - Gibberella zeae PH-1
Length = 394
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RAGEGAQKEDQRSRKENKGKPEPKPAKGV-TVPTRKGIKETQNVKSQDXKSGEQQKGK 384
R G A + D+R +K++ KP P+P K TRK +K + K + GK
Sbjct: 128 RRGSSATQPDRRRQKQSPAKPGPEPTKSARRASTRKTLKAEPTATAASEKPRRGRMGK 185
>UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|Rep:
MGC68500 protein - Xenopus laevis (African clawed frog)
Length = 404
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDAL 205
M++++G V NR+ LDDE+DPLD L
Sbjct: 18 MQDNFGCAVGNRFHQLLDDESDPLDFL 44
>UniRef50_Q0LL43 Cluster: Putative uncharacterized protein; n=2;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 253
Score = 34.3 bits (75), Expect = 2.9
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 142 CGSSEQIRSFLGR*DRSS*CVKSARAGEGAQKEDQRSRK--ENKGKPEPKPAKG---VTV 306
CGS I+S+ GR + C S E A+K+ R R+ E KP P PA+G
Sbjct: 33 CGSEATIQSYPGR--TPTLC--SPECAEAARKDHDRQRRAAERANKPAPAPARGRKPKPR 88
Query: 307 PTRKGIKETQNVKSQDXKSGEQQK 378
PTR + +Q +S D Q K
Sbjct: 89 PTRFVLWPSQVDRSLDRSLDSQLK 112
>UniRef50_UPI00006CCC7B Cluster: hypothetical protein
TTHERM_00338030; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00338030 - Tetrahymena
thermophila SB210
Length = 886
Score = 33.9 bits (74), Expect = 3.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 214 RAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKG 381
++ + Q E + S ENK + KP KG+ T++G K N+ + +QKG
Sbjct: 677 KSSQSNQLESENSGTENKNGEQEKPKKGIL--TKRGTKAISNILMSQKQQFYKQKG 730
>UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -
Fugu rubripes (Japanese pufferfish) (Takifugu rubripes)
Length = 361
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 220
+ +++G V NR+ LDD+ DPLD L E+
Sbjct: 2 LPDAFGCAVANRFGNLLDDDADPLDLLSEAEK 33
>UniRef50_Q5KZ95 Cluster: Putative uncharacterized protein GK1706;
n=1; Geobacillus kaustophilus|Rep: Putative
uncharacterized protein GK1706 - Geobacillus
kaustophilus
Length = 114
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +1
Query: 220 GEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKG------IKETQNVKSQDXKSGEQQKG 381
GE Q+E Q S +E KGK E + + +KG K+T + ++++ KS +++KG
Sbjct: 14 GEQKQQESQASHQEKKGKKEDEQHEKEKEKKKKGEEKAKDDKKTDSAETKEEKSEKEKKG 73
Query: 382 K 384
K
Sbjct: 74 K 74
>UniRef50_A6C5H6 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 594
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 205 KSARAGEGAQKEDQRSRKENKGKPEPKPAK-GVTVPTRKGIKETQNVKSQDXKSGEQQKG 381
+ ++ G+ K D S+K +K + + KP + G + P +KG +E + D +SGEQQ+
Sbjct: 240 QKSQEGKSDSKSDADSKKSSKSESQGKPPENGKSDPDQKGSEE----QKSDQQSGEQQQS 295
Query: 382 K 384
+
Sbjct: 296 Q 296
>UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aedes
aegypti|Rep: Putative mRNA binding protein - Aedes
aegypti (Yellowfever mosquito)
Length = 419
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +2
Query: 125 MEN-SYGVGVVNRYALF-LDDE-TDPLDALKAREQ 220
MEN SYG+ V NRY LF +DDE DP + + ++Q
Sbjct: 1 MENTSYGINVANRYDLFSIDDEGDDPFETITQKKQ 35
>UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein,
putative; n=2; Filobasidiella neoformans|Rep:
Single-stranded DNA binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 441
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 205 KSARAGEGA----QKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKS 363
KSA++ A K+D++S+K+ K P P PAK +K +KE + KS+ K+
Sbjct: 3 KSAKSAPAATVKVDKKDKKSKKDEKPVPAPAPAKAA----KKDVKEKKEKKSKKAKT 55
>UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1
RNA-binding protein; n=54; Euteleostomi|Rep: Plasminogen
activator inhibitor 1 RNA-binding protein - Homo sapiens
(Human)
Length = 408
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 125 MENSYGVGVVNRYALFLDDETDPLDALKARE 217
++ +G V NR+ DDE+DP + LKA E
Sbjct: 5 LQEGFGCVVTNRFDQLFDDESDPFEVLKAAE 35
>UniRef50_Q7YR37 Cluster: ATP-binding cassette sub-family F member
1; n=30; Eumetazoa|Rep: ATP-binding cassette sub-family
F member 1 - Pan troglodytes (Chimpanzee)
Length = 807
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 238 EDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 393
+DQ +E + K PKPAK K + E Q + K G+++K KG A
Sbjct: 137 QDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQ-PALKGKKGKEEKSKGKA 187
>UniRef50_Q8NE71 Cluster: ATP-binding cassette sub-family F member
1; n=18; Tetrapoda|Rep: ATP-binding cassette sub-family
F member 1 - Homo sapiens (Human)
Length = 845
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 238 EDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGEQQKGKGPA 393
+DQ +E + K PKPAK K + E Q + K G+++K KG A
Sbjct: 137 QDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQ-PALKGKKGKEEKSKGKA 187
>UniRef50_A5DE38 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1397
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 205 KSARAGEGAQKEDQRSRKENKGK--PEPKPAKGVTVPTRKGIKETQN--VKSQDXKSGEQ 372
K+ E K + +S+ E K K P PKP K PT+ + T+N K ++
Sbjct: 885 KAKPKSEPKSKSEPKSKSEPKAKSEPRPKPEKSKPKPTKPKTESTENGTTKVARIPKKKE 944
Query: 373 QKGKGP 390
K +GP
Sbjct: 945 SKAEGP 950
>UniRef50_A5JZQ4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1075
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 223 EGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSGE 369
E K+++ +K KGK EPK KG RKG K + K ++ K E
Sbjct: 108 EEEDKKEEEDKKGKKGKKEPKGKKG---GARKGKKAAADEKEENDKKDE 153
>UniRef50_Q2KFA9 Cluster: Putative uncharacterized protein; n=5;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea 70-15
Length = 446
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 211 ARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSQDXKSG 366
A + A+ +D + K KP+P PA VP +K I +T+ K + K+G
Sbjct: 290 AASNHDAEGDDDTTTAPKKKKPKPSPAIAAAVP-KKVILKTKGPKKEKVKTG 340
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,660,307
Number of Sequences: 1657284
Number of extensions: 9662888
Number of successful extensions: 25568
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 24033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25429
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -