Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30561.Seq
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 81 2e-15
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 81 2e-15
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 81 2e-15
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 58 1e-08
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 58 1e-08
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 58 1e-08
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 58 1e-08
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 58 1e-08
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 36 0.059
AE014297-2937|AAS65190.1| 181|Drosophila melanogaster CG17284-P... 31 1.3
AE014297-2936|AAF55855.2| 196|Drosophila melanogaster CG17284-P... 31 1.3
AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA... 31 2.2
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916... 29 6.7
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ... 29 6.7
AY058625-1|AAL13854.1| 804|Drosophila melanogaster LD32196p pro... 29 8.9
AE014297-1958|AAF55144.1| 804|Drosophila melanogaster CG12241-P... 29 8.9
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 81.0 bits (191), Expect = 2e-15
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHKTQHYLC 672
+RIAEPYI WGYPNLKSVREL+YKRGF K + R+PIT N ++E++L + C
Sbjct: 123 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 177
Score = 79.0 bits (186), Expect = 6e-15
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY-VSPSLTLLGDTPT*RVSVS*YTNVDSPS* 598
+VRKVLQLFRLRQINNGVF++LNKAT+NM ++ G V Y
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 153
Query: 599 VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
V + + R+ H I CV DL+HEIFTV +YASNFLW
Sbjct: 154 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLW 200
Score = 70.9 bits (166), Expect = 2e-12
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +3
Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
K+A ++E RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 28 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87
Query: 405 INQVSPK 425
IN+V+PK
Sbjct: 88 INKVAPK 94
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 81.0 bits (191), Expect = 2e-15
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHKTQHYLC 672
+RIAEPYI WGYPNLKSVREL+YKRGF K + R+PIT N ++E++L + C
Sbjct: 136 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 190
Score = 79.0 bits (186), Expect = 6e-15
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY-VSPSLTLLGDTPT*RVSVS*YTNVDSPS* 598
+VRKVLQLFRLRQINNGVF++LNKAT+NM ++ G V Y
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 599 VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
V + + R+ H I CV DL+HEIFTV +YASNFLW
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLW 213
Score = 70.9 bits (166), Expect = 2e-12
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +3
Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
K+A ++E RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 405 INQVSPK 425
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 115 PVKGKEDSKKLPAVPESVLK 174
PV K +KKLPAVPES LK
Sbjct: 4 PVVKKPAAKKLPAVPESKLK 23
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 81.0 bits (191), Expect = 2e-15
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHKTQHYLC 672
+RIAEPYI WGYPNLKSVREL+YKRGF K + R+PIT N ++E++L + C
Sbjct: 136 LRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 190
Score = 79.0 bits (186), Expect = 6e-15
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY-VSPSLTLLGDTPT*RVSVS*YTNVDSPS* 598
+VRKVLQLFRLRQINNGVF++LNKAT+NM ++ G V Y
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 599 VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
V + + R+ H I CV DL+HEIFTV +YASNFLW
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLW 213
Score = 70.9 bits (166), Expect = 2e-12
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +3
Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
K+A ++E RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 405 INQVSPK 425
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 115 PVKGKEDSKKLPAVPESVLK 174
PV K +KKLPAVPES LK
Sbjct: 4 PVVKKPAAKKLPAVPESKLK 23
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/47 (46%), Positives = 38/47 (80%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+R+ EP++ +G P+L S+RELV+K+GFA++ G + I SN++VE++L
Sbjct: 141 LRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/47 (46%), Positives = 38/47 (80%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+R+ EP++ +G P+L S+RELV+K+GFA++ G + I SN++VE++L
Sbjct: 141 LRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/47 (46%), Positives = 38/47 (80%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+R+ EP++ +G P+L S+RELV+K+GFA++ G + I SN++VE++L
Sbjct: 141 LRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/47 (46%), Positives = 38/47 (80%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+R+ EP++ +G P+L S+RELV+K+GFA++ G + I SN++VE++L
Sbjct: 141 LRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/47 (46%), Positives = 38/47 (80%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+R+ EP++ +G P+L S+RELV+K+GFA++ G + I SN++VE++L
Sbjct: 141 LRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQL 187
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 35.9 bits (79), Expect = 0.059
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 559 HSLSWGI-PKQCKARRYVHIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 419
H L GI P H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 44 HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 32.7 bits (71), Expect = 0.55
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 416 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 279
+LVDT D+DDK QFG G+V + + + D F LD + L +L
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -2
Query: 645 PLLNNAVGSDWYTXSTQLGESTFVY*LTDTL*VGVSPSNVRLGD 514
PL + +G D + + L EST V L L +G++P +V LGD
Sbjct: 17 PLDHEVIG-DGHALAVMLHESTLVDQLPHGLQIGIAPGDVGLGD 59
>AE014297-2937|AAS65190.1| 181|Drosophila melanogaster CG17284-PB,
isoform B protein.
Length = 181
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 226 KRRSSAIKKKGKSSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESVV 405
++ AI KS G NST+ N RN +KSD HA +A +F + N L S V
Sbjct: 26 QKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGTV 82
Query: 406 STK 414
+T+
Sbjct: 83 NTQ 85
>AE014297-2936|AAF55855.2| 196|Drosophila melanogaster CG17284-PA,
isoform A protein.
Length = 196
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 226 KRRSSAIKKKGKSSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESVV 405
++ AI KS G NST+ N RN +KSD HA +A +F + N L S V
Sbjct: 41 QKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGTV 97
Query: 406 STK 414
+T+
Sbjct: 98 NTQ 100
>AE014298-3107|AAF50836.3| 1637|Drosophila melanogaster CG1801-PA
protein.
Length = 1637
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -1
Query: 556 SLSWGIPKQCKARRYVHIHSSLIQTYKHTIVYLAQSKQLQNFTDFGETWLIPRIRMTNAN 377
++ W +P +RR V+ Q TI+YL ++ QNF +FG+ + +R+ + +
Sbjct: 430 AIQWRMPGTFLSRRIVNNRPRKQQESDTTIMYLGRAPSFQNF-EFGDVGSVELMRLRHVS 488
>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
protein.
Length = 1260
Score = 29.1 bits (62), Expect = 6.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 RSSAIKKKGKSSRGLNSTSRNTA-SRNVMKSD*PDKHAIVATTTFP 366
RSS K+GKS+ STSR + SRN S+ +H++ + T P
Sbjct: 42 RSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPP 87
>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
isoform A protein.
Length = 1260
Score = 29.1 bits (62), Expect = 6.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 RSSAIKKKGKSSRGLNSTSRNTA-SRNVMKSD*PDKHAIVATTTFP 366
RSS K+GKS+ STSR + SRN S+ +H++ + T P
Sbjct: 42 RSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPP 87
>AY058625-1|AAL13854.1| 804|Drosophila melanogaster LD32196p
protein.
Length = 804
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -1
Query: 544 GIPKQCKARRYVHIHSSLIQTYK-----HTIVYLAQSKQLQNFTDFGETWLIPRIRMTNA 380
GIP +A+ ++ + +L + K H IV + + QL + L RI TNA
Sbjct: 164 GIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLL--RILPTNA 221
Query: 379 NLASPGT**LPRLRACLASL 320
++P +PRLR L +
Sbjct: 222 CFSNPNGTGIPRLRRILRGI 241
>AE014297-1958|AAF55144.1| 804|Drosophila melanogaster CG12241-PA
protein.
Length = 804
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -1
Query: 544 GIPKQCKARRYVHIHSSLIQTYK-----HTIVYLAQSKQLQNFTDFGETWLIPRIRMTNA 380
GIP +A+ ++ + +L + K H IV + + QL + L RI TNA
Sbjct: 164 GIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLL--RILPTNA 221
Query: 379 NLASPGT**LPRLRACLASL 320
++P +PRLR L +
Sbjct: 222 CFSNPNGTGIPRLRRILRGI 241
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,158,823
Number of Sequences: 53049
Number of extensions: 611748
Number of successful extensions: 1503
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -