Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30561.Seq
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 77 1e-14
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 77 1e-14
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 76 2e-14
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 76 3e-14
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 76 3e-14
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 76 3e-14
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 55 4e-08
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 29 3.3
At1g72470.1 68414.m08380 exocyst subunit EXO70 family protein co... 29 4.3
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 10.0
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 10.0
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = +3
Query: 261 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFC 440
IFKRAEQY KEY K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K
Sbjct: 49 IFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKIL 108
Query: 441 NCL 449
L
Sbjct: 109 QLL 111
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +GYPNLKSV+EL+YKRG+ KL+ RI +T NSIV++ L K
Sbjct: 132 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGK 180
Score = 66.9 bits (156), Expect = 1e-11
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKATVNM V P +T G V Y
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVT-YGYPNLKSVKELIYKRGYGKL 161
Query: 596 *VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
+ + +++ + KH IICV DLIHEI TV + A+NFLW
Sbjct: 162 NHQRIALT-DNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLW 208
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = +3
Query: 261 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFC 440
IFKRAEQY KEY K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K
Sbjct: 44 IFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKIL 103
Query: 441 NCL 449
L
Sbjct: 104 QLL 106
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +GYPNLKSV+EL+YKRG+ KL+ RI +T NSIV++ L K
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGK 175
Score = 66.9 bits (156), Expect = 1e-11
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKATVNM V P +T G V Y
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVT-YGYPNLKSVKELIYKRGYGKL 156
Query: 596 *VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
+ + +++ + KH IICV DLIHEI TV + A+NFLW
Sbjct: 157 NHQRIALT-DNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLW 203
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
+ + IFKRAEQY KEY KE++ I L R+A+ +G +YV EAKL F+IRIRGIN + PK
Sbjct: 39 ENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPK 98
Query: 426 SVKFCNCL 449
+ K L
Sbjct: 99 TKKILQLL 106
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +G+PNLKSV+EL+YKRG+ KL+ RI +T NSIVE+ L K
Sbjct: 127 LRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGK 175
Score = 64.9 bits (151), Expect = 5e-11
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKAT+NM V P +T G V Y
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVT-YGFPNLKSVKELIYKRGYGKL 156
Query: 596 *VDXVYQSLPTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
+ + +++ + KH IIC DLIHEI TV + A+NFLW
Sbjct: 157 NHQRIALT-DNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLW 203
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ + IF RA+QY KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK
Sbjct: 41 EKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPK 100
Query: 426 SVKFCNCL 449
+ K L
Sbjct: 101 TKKILQLL 108
Score = 68.5 bits (160), Expect = 4e-12
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKAT+NM V P +T P + SV
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTY--GYPNLK-SVKELIYKRGFG 156
Query: 596 *VDXVYQSL-PTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
++ +L +++ +G KH IICV DLIHEI TV + A+NFLW
Sbjct: 157 KLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLW 205
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +GYPNLKSV+EL+YKRGF KL+ R +T NSIV++ L K
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGK 177
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ + IF RA+QY KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK
Sbjct: 41 EKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPK 100
Query: 426 SVKFCNCL 449
+ K L
Sbjct: 101 TKKILQLL 108
Score = 68.5 bits (160), Expect = 4e-12
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKAT+NM V P +T P + SV
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTY--GYPNLK-SVKELIYKRGFG 156
Query: 596 *VDXVYQSL-PTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
++ +L +++ +G KH IICV DLIHEI TV + A+NFLW
Sbjct: 157 KLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLW 205
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +GYPNLKSV+EL+YKRGF KL+ R +T NSIV++ L K
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGK 177
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ + IF RA+QY KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK
Sbjct: 41 EKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPK 100
Query: 426 SVKFCNCL 449
+ K L
Sbjct: 101 TKKILQLL 108
Score = 68.5 bits (160), Expect = 4e-12
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTLLGDTPT*RVSVS*YTNVDSPS 595
+ +K+LQL RLRQI NGVF+++NKAT+NM V P +T P + SV
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTY--GYPNLK-SVKELIYKRGFG 156
Query: 596 *VDXVYQSL-PTALLRRGSIKHNIICVXDLIHEIFTVWRKVQYASNFLW 739
++ +L +++ +G KH IICV DLIHEI TV + A+NFLW
Sbjct: 157 KLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLW 205
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +1
Query: 508 VRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRLHK 654
+R EPY+ +GYPNLKSV+EL+YKRGF KL+ R +T NSIV++ L K
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGK 177
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/43 (46%), Positives = 33/43 (76%)
Frame = +1
Query: 520 EPYIAWGYPNLKSVRELVYKRGFAKLSGXRIPITSNSIVEKRL 648
+PY+ +GYPN KSV++L+YK+G + G +P+T N+I+E+ L
Sbjct: 135 QPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQAL 177
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +3
Query: 267 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNC 446
KR E +V E+R KE D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N
Sbjct: 50 KRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNN 109
Query: 447 L 449
L
Sbjct: 110 L 110
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 271 GLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRS 426
G + T R+ +R + SD K+ V+ T GK HLS E VS F RS
Sbjct: 407 GASVTPRSIKARRALLSD---KNEKVSVTERNGKLGTHLSDEISVSEGFRRS 455
>At1g72470.1 68414.m08380 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 633
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 517 RYVHIHSSLIQTYKHTIVYLAQSKQLQNFTD 425
RYV + SLI Y+ T++ L SK +N TD
Sbjct: 387 RYVMNYISLISEYRPTLIDLIMSKPSRNATD 417
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 377 IGICHPNPWYQPSFTEVRKVL 439
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 454 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 359
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,177,346
Number of Sequences: 28952
Number of extensions: 297271
Number of successful extensions: 754
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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