Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30560.Seq
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 137 1e-31
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 130 2e-29
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 106 3e-22
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 104 1e-21
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 92 6e-18
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 87 2e-16
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 85 7e-16
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 83 4e-15
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 81 1e-14
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 77 3e-13
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 75 1e-12
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 64 1e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 58 2e-07
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 5e-06
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 46 4e-04
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 44 0.002
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 43 0.004
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 41 0.020
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 41 0.020
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 38 0.10
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 38 0.14
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 38 0.18
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 36 0.42
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 36 0.42
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 36 0.42
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 35 0.97
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 35 1.3
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 1.7
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 34 2.2
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 33 3.9
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 33 3.9
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 33 5.2
UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep: ... 32 9.0
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.0
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 32 9.0
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 137 bits (332), Expect = 1e-31
Identities = 60/78 (76%), Positives = 74/78 (94%)
Frame = +1
Query: 22 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 201
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 202 VDIRVTVKGGGHVAQVYA 255
VDIRV VKGGGHVAQ+YA
Sbjct: 66 VDIRVRVKGGGHVAQIYA 83
Score = 125 bits (302), Expect = 5e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 435 SYR 443
SYR
Sbjct: 144 SYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 130 bits (314), Expect = 2e-29
Identities = 60/82 (73%), Positives = 73/82 (89%)
Frame = +1
Query: 10 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 189
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 190 KFSMVDIRVTVKGGGHVAQVYA 255
+F+ VDIR+ VKGGG+VAQ+YA
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYA 85
Score = 126 bits (303), Expect = 4e-28
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
IRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQK
Sbjct: 86 IRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQK 145
Query: 435 SYR 443
SYR
Sbjct: 146 SYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 106 bits (255), Expect = 3e-22
Identities = 46/77 (59%), Positives = 64/77 (83%)
Frame = +1
Query: 25 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 204
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 205 DIRVTVKGGGHVAQVYA 255
DIRV V GGGHV+QVYA
Sbjct: 64 DIRVRVTGGGHVSQVYA 80
Score = 96.3 bits (229), Expect = 4e-19
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
IRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QK
Sbjct: 81 IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQK 140
Query: 435 SYR 443
SYR
Sbjct: 141 SYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 104 bits (250), Expect = 1e-21
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
IRQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQK
Sbjct: 93 IRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQK 152
Query: 435 SYR 443
SYR
Sbjct: 153 SYR 155
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 163 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYA 255
EP+L++G +KF+ VDIRV V GGGH +QVYA
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYA 92
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 92.3 bits (219), Expect = 6e-18
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +3
Query: 225 GWWSCSTSLRIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 404
G + S IRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 405 GPGARARYQKSYR 443
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 79.4 bits (187), Expect = 5e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +1
Query: 31 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 198
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 87.0 bits (206), Expect = 2e-16
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQK
Sbjct: 83 VRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQK 142
Query: 435 SYR 443
SYR
Sbjct: 143 SYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 85.4 bits (202), Expect = 7e-16
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = +3
Query: 225 GWWSCSTSLRIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 404
G S + RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 405 GPGARARYQKSYR 443
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 201
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 202 VDIRVTVKGGGHVAQVYAS 258
+ I V V GGG V+Q YA+
Sbjct: 69 LRIDVAVHGGGQVSQAYAA 87
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 83.0 bits (196), Expect = 4e-15
Identities = 50/145 (34%), Positives = 69/145 (47%)
Frame = +1
Query: 25 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 204
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 205 DIRVTVKGGGHVAQVYASDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 384
DI V VKG GHV Q+YA + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 385 XXXXXXXXXXXXXDTRNLTVKPSRK 459
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 7 EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK 186
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 187 EKFSMVDIRVTVKGGGHVAQVYASDKLFQR 276
F +D+ + V GGGHV+Q+YA + R
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISR 105
Score = 78.6 bits (185), Expect = 8e-14
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +3
Query: 255 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 434
+RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QK
Sbjct: 99 VRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQK 155
Query: 435 SYR 443
SYR
Sbjct: 156 SYR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 76.6 bits (180), Expect = 3e-13
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +3
Query: 219 SQGWWSCSTSLRIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 398
S+G S IRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 399 FGGPGARARYQKSYR 443
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 68.5 bits (160), Expect = 9e-11
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 34 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 213
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 214 VTVKGGGHVAQVYA 255
+ KGGG V+Q+YA
Sbjct: 63 IFSKGGGKVSQIYA 76
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 74.5 bits (175), Expect = 1e-12
Identities = 30/78 (38%), Positives = 55/78 (70%)
Frame = +1
Query: 25 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 204
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 205 DIRVTVKGGGHVAQVYAS 258
DI V V+GGG + Q A+
Sbjct: 61 DIDVKVQGGGFMGQAEAA 78
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 276 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 443
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 64.5 bits (150), Expect = 1e-09
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 198
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 199 MVDIRVTVKGGGHVAQVYA 255
V I V V G G VAQ+YA
Sbjct: 83 RVGIWVRVNGVGRVAQIYA 101
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 225
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 226 GGGHVAQVYA 255
GGG + Q A
Sbjct: 71 GGGVMGQADA 80
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 9/72 (12%)
Frame = +3
Query: 255 IRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 407
+R AI++ L+ F++ + +D+ S+ +++ +++DR++LV DPRR EP+K+
Sbjct: 81 VRMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMR 139
Query: 408 PGARARYQKSYR 443
AR R+QKSYR
Sbjct: 140 YSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +3
Query: 309 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 443
+ ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 43 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 223 KGGGHVAQVYAS 258
KGGG + Q AS
Sbjct: 69 KGGGFMGQAGAS 80
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 219
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 220 VKGGGHVAQVYA 255
V GGG AQ A
Sbjct: 69 VLGGGFAAQADA 80
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 223 KGGGHVAQVYAS 258
KGGG Q A+
Sbjct: 69 KGGGFTGQAGAT 80
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 16 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 108
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 223 KGGG 234
KGGG
Sbjct: 66 KGGG 69
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 34 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 207
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 208 IRVTVKGGGHVAQVYA 255
+ V GGG +Q A
Sbjct: 65 FYIKVSGGGINSQAEA 80
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 223 KGGGHVAQVYA 255
GGG Q A
Sbjct: 139 TGGGTTGQTGA 149
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 40.7 bits (91), Expect = 0.020
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 223 KGGGHVAQVYA 255
+GGG Q A
Sbjct: 71 QGGGDSGQAGA 81
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 38.3 bits (85), Expect = 0.10
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+K A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 223 KGGGHVAQVYA 255
GGG Q A
Sbjct: 120 GGGGPTGQAGA 130
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 37.9 bits (84), Expect = 0.14
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 223 KGGGHVAQVYA 255
GGGH Q A
Sbjct: 87 AGGGHTGQAGA 97
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.5 bits (83), Expect = 0.18
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 192
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 193 FSMVDIRVTVKGGGHVAQVYAS 258
+ D+ + V GGG QV A+
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIAT 82
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 36.3 bits (80), Expect = 0.42
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 225
G++KT++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 226 GGGHVAQVYA 255
GGG Q A
Sbjct: 254 GGGVTGQAEA 263
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 36.3 bits (80), Expect = 0.42
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 223 KGGGHVAQVYA 255
GGG Q A
Sbjct: 68 DGGGFTGQAGA 78
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 36.3 bits (80), Expect = 0.42
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVDIRV 216
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 217 TVKGGGHVAQVYA 255
VKGGG V QV A
Sbjct: 77 KVKGGGLVGQVNA 89
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 35.1 bits (77), Expect = 0.97
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 225
GR+K + A + + G G +VN + D+ P +L ++ L + DI+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 226 GGGHVAQVYASDKLFQRL*SPSTRNM*T 309
GGG + F R P +M T
Sbjct: 82 GGGTTGKTSPQSLRFLRRLVPKFSDMRT 109
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 34.7 bits (76), Expect = 1.3
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 219
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 220 VKGGGHVAQ 246
+GGG Q
Sbjct: 75 AEGGGLTGQ 83
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 10 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 177
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 33.9 bits (74), Expect = 2.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 222
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 223 KGGG 234
GGG
Sbjct: 74 YGGG 77
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 33.1 bits (72), Expect = 3.9
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 28 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 198
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEK-- 150
Query: 199 MVDIRVTVKGGGHVAQVYA 255
D+ V V GGG Q A
Sbjct: 151 NYDVFVKVHGGGLSGQAQA 169
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 33.1 bits (72), Expect = 3.9
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 195
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 196 SMVDIRVTVKGGGHVAQVYA 255
D+ + GGG Q A
Sbjct: 101 GRYDVIARISGGGVSGQAGA 120
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVDIRVTV 222
G++K ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 223 KGGGHVAQVYA 255
+GGG Q A
Sbjct: 159 RGGGVTGQAEA 169
>UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep:
U2266c - Mycobacterium leprae
Length = 146
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 415 APGPPNFLGSQRRGSATSKLLSYCTRMSLISFFEASSTYFW 293
A GP N + S R G T+ LLS T ++F TY W
Sbjct: 101 ALGPQNCIHSSRTGQTTAHLLSEHTETCCLTFVPIRWTYVW 141
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 354 RSLLVADPRRCEPKKFGGPGARARY 428
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 49 RKKTATAVAYCKRGHGMLRV-NGRPLDLVEPRLLQYKLQEP 168
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 119 HWTWLSPDC--CSTNFRNLSFCSARKNSLWLTSE*QSRV 229
H T L DC C N LS C R +LW TS S++
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKI 220
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,482,149
Number of Sequences: 1657284
Number of extensions: 11477429
Number of successful extensions: 30434
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 29602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30424
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -