Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30558.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    27   0.19 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    26   0.34 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    25   0.59 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.7  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 284 PCGNASADSDRRNIVSRSRERNSVLNVK 367
           PC    AD D+ N V+   E  S LN K
Sbjct: 145 PCQRGGADEDKVNFVTLLGELKSALNAK 172


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 284 PCGNASADSDRRNIVSRSRERNSVLNVKKL 373
           PC     D D+ N V+   E  S LN K L
Sbjct: 146 PCQRGGVDEDKVNFVTLLGELKSALNAKGL 175


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 284 PCGNASADSDRRNIVSRSRERNSVLNVK 367
           PC     D D+ N V+   E  S LN K
Sbjct: 146 PCQRGGVDEDKVNFVTLLGELKSALNAK 173


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 340 SRARDDVSPVAVGARVPARLPR 275
           ++AR++ + V  G+R P  +PR
Sbjct: 160 AKAREEATVVPEGSRTPIEIPR 181


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 515 WYFVPALTTFFL*SELCS 462
           WY V A T  FL  E+C+
Sbjct: 267 WYTVNASTNIFLCDEICN 284


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 515 WYFVPALTTFFL*SELCS 462
           WY V A T  FL  E+C+
Sbjct: 267 WYTVNASTNIFLCDEICN 284


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 340 SRARDDVSPVAVGARVPARLPR 275
           +RAR++   V  G+R P  +P+
Sbjct: 160 ARAREEAHIVPEGSRTPIEIPQ 181


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 562 LLYTPAVPTTSRPSAAGTSYPRL 494
           LL T AVP +    AAG   P +
Sbjct: 674 LLLTAAVPASFEAIAAGYDVPEI 696


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,990
Number of Sequences: 336
Number of extensions: 876
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)