Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30558.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.     29   4.6  
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P...    29   4.6  

>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
          Length = 1854

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 590 PLXXRPAAPXPI*RXPSTALSTPRRAXVEPR 682
           P   +PA P P+ R P+ A   PRR+   PR
Sbjct: 242 PTNGQPAPPVPLHRKPAAAPVVPRRSQSTPR 272


>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
           isoform D protein.
          Length = 1854

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 590 PLXXRPAAPXPI*RXPSTALSTPRRAXVEPR 682
           P   +PA P P+ R P+ A   PRR+   PR
Sbjct: 242 PTNGQPAPPVPLHRKPAAAPVVPRRSQSTPR 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,165,244
Number of Sequences: 53049
Number of extensions: 177040
Number of successful extensions: 499
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)