Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30556.Seq
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.3  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   4.0  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   4.0  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   4.0  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           24   5.3  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   5.3  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   9.2  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 454 ARFHPRCQTAHRRSKQNGSTEPPYS 528
           ARF P   T+HR S  N S+  P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +2

Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRXY 562
           V  G G+ ++ +    Q++   +L     ++  ++   + M+ + HHT   +LR +   +
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 563 PHTSRRLGYNPAA 601
           P        NP A
Sbjct: 103 PVLLTEAPLNPKA 115


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +2

Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRXY 562
           V  G G+ ++ +    Q++   +L     ++  ++   + M+ + HHT   +LR +   +
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 563 PHTSRRLGYNPAA 601
           P        NP A
Sbjct: 103 PVLLTEAPLNPKA 115


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +2

Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRXY 562
           V  G G+ ++ +    Q++   +L     ++  ++   + M+ + HHT   +LR +   +
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 563 PHTSRRLGYNPAA 601
           P        NP A
Sbjct: 103 PVLLTEAPLNPKA 115


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +2

Query: 386 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMDPLNHHTVSPDLRKSRRXY 562
           V  G G  +A +    Q++   +L     ++  +I   + M+ + HHT   +LR +   +
Sbjct: 44  VMVGMGNKDAYVGDEAQSKR-GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 563 PHTSRRLGYNP 595
           P        NP
Sbjct: 103 PVLLTEAPLNP 113


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 641 VVSVPIQKMGTKRQQLGCSPIFW 573
           ++SVP+       Q L  +PIFW
Sbjct: 6   IISVPLLSAAVLLQPLLAAPIFW 28


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 272 WKFETSKYYVTIIDAPG 322
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 474 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 352
           T R  AS   S   P   IPA + PVPA      QS   +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,154
Number of Sequences: 2352
Number of extensions: 15602
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)