Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30554.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 139 5e-32
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 133 5e-30
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 119 6e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 117 2e-25
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 116 7e-25
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 115 1e-24
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 56 4e-15
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 81 3e-14
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 80 6e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 78 2e-13
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 78 2e-13
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 77 4e-13
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 76 1e-12
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 74 3e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 74 4e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 69 1e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 65 2e-09
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 64 2e-09
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 57 5e-07
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 53 8e-06
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 52 1e-05
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 49 1e-04
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 47 5e-04
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.004
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 44 0.004
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.044
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 36 1.3
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 2.9
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 34 3.9
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 34 3.9
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 33 5.1
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 33 5.1
UniRef50_A1UFD6 Cluster: Amidohydrolase 2; n=25; Actinomycetales... 33 8.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 139 bits (337), Expect = 5e-32
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 133 bits (321), Expect = 5e-30
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY G FEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 184 IVVNLTGRLNK 194
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRK
Sbjct: 196 GVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRK 242
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 119 bits (287), Expect = 6e-26
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = -3
Query: 447 SDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVVNLTG 268
SDALKSI NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIG FEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 267 RLNK 256
RLNK
Sbjct: 234 RLNK 237
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+K
Sbjct: 239 GVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQK 285
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 117 bits (282), Expect = 2e-25
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVR++VL+D LKS+ NAEKRGKRQV+IRP SKVI+KFL VM KHGYIG FE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 288 IVVNLTGRLNK 256
IVV L GRLNK
Sbjct: 61 IVVELNGRLNK 71
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/47 (78%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 116 bits (278), Expect = 7e-25
Identities = 56/71 (78%), Positives = 63/71 (88%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVR NVL+DALK I NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIG FEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 288 IVVNLTGRLNK 256
+VV LT RLNK
Sbjct: 60 MVVYLTDRLNK 70
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRK
Sbjct: 72 GVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRK 118
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 115 bits (277), Expect = 1e-24
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MV MNVL DALKS +AEK GKRQ IR CSK IV+FLTVMMKHGYI FEI+DDHRAGK
Sbjct: 99 MVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGK 158
Query: 288 IVVNLTGRLNK 256
+VVNLTGRLNK
Sbjct: 159 MVVNLTGRLNK 169
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+K
Sbjct: 171 GVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQK 217
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 55.6 bits (128), Expect(2) = 4e-15
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = -3
Query: 435 KSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 337
+S+ NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 44 ESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 48.4 bits (110), Expect(2) = 4e-15
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 336 GYIGXFEIVDDHRAGKIVVNLTGRLNK 256
GYI FE +DDHRAGKIVV L GR+NK
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINK 133
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
M +N L++AL ++ N E R +Q LI P SK+I+ L VM K GYIG FE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 288 IVVNLTGRLNK 256
I+V L GR+NK
Sbjct: 61 IIVQLLGRINK 71
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -2
Query: 253 GVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKXL 110
G ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +
Sbjct: 73 GPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKI 124
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = +3
Query: 522 YP-ISPXXESYYNSLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEK 665
YP + ESYY LAVVLQRRD ENPGVTQLNRLAAHPPFASWRNSE+
Sbjct: 55 YPLVKALSESYYG-LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 102
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +1
Query: 559 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGXIAKKAR 672
HWPSFYNVVTGKTLALPNLIALQHIPLSPAG I+++AR
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEAR 42
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 555 NSLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEK 665
NSLAVVLQRRD ENPGVTQLNRLAAHPPFASWRNSE+
Sbjct: 20 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 56
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIG FE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 288 IVVNLTGRLNK 256
V L GR+NK
Sbjct: 61 YRVQLLGRINK 71
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 259 QVGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGI 121
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 555 NSLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEK 665
+SLAVVLQRRD ENPGVTQLNRLAAHPPFASWRNSE+
Sbjct: 6 DSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 42
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 558 SLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEK 665
+LAVVLQRRD ENPGVTQLNRLAAHPPFASWRNSE+
Sbjct: 25 ALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 60
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = -3
Query: 453 VLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVVNL 274
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 273 TGRLN 259
GR+N
Sbjct: 65 QGRVN 69
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -2
Query: 238 RFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRK 116
R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKR 118
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 288 IVVNLTGRLNK 256
V L GR+NK
Sbjct: 61 YSVTLVGRINK 71
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
G I PR+ V ERW LP++ FG L+LTTS G+M EAR K +
Sbjct: 73 GAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKI 121
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -3
Query: 459 MNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVV 280
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 279 NLTGRLN 259
L+G +N
Sbjct: 63 ELSGNIN 69
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
G I PRF + + E + LP+R FG L+++T+ G+M ++AR++ L
Sbjct: 72 GAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRL 120
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = -3
Query: 450 LSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVVNLT 271
L++ K+I NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 270 GRLNK 256
GRLN+
Sbjct: 65 GRLNR 69
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEE 128
G ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 71 GAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = -3
Query: 513 PRNSVRYEARAKSXPMVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHG 334
PR R+ R M + ++AL + NAE G + P S +I L V+ G
Sbjct: 3 PRGRPRHGIREVQLIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRG 62
Query: 333 YIGXFEIVDDHRAGKIVVNLTGRLNK 256
Y+ FE VDD +AGK V L G +N+
Sbjct: 63 YVDGFEYVDDGKAGKFEVELKGAINE 88
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 259 QVGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
+ G + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGI 138
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +3
Query: 558 SLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEKGPQRFGPFP 692
SL +L RRD ENP +TQ +RL AHPPF SWR+ E Q+ P P
Sbjct: 14 SLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESA-QKDRPSP 57
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
M N+L++ ++ N E R + + P SK+ V+ L + K GYIG FE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 288 IVVNLTGRLNK 256
V+L ++ K
Sbjct: 61 FSVHLLAKITK 71
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
G ISPRF V + W LPS G LV+TT+ G+M H EA + +
Sbjct: 73 GAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGI 121
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 119
GVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 72 GVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +3
Query: 504 NCGGARYPISPXXESYYNSLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEKGP 671
N GGAR PISP S A L+RR+ +NPG QLN L A P F ++K P
Sbjct: 37 NPGGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAP 92
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = -3
Query: 456 NVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVVN 277
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 276 LTGRLNK 256
L+ N+
Sbjct: 64 LSEYFNE 70
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 259 QVGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKXL 110
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKI 120
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +3
Query: 528 ISPXXESYYNSLAVVLQRRDXENPGVTQLNRLAAHPPFASWRN 656
IS S+ VL R D N +T LNRL AHP FASWR+
Sbjct: 3 ISDTGRSHTPDFHAVLAREDWHNQTITHLNRLPAHPVFASWRD 45
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 561 LAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSEK 665
LA +L R D +NP +T +NRL +H P WR++++
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR 52
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 40.3 bits (90), Expect = 0.044
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -3
Query: 330 IGXFEIVDDHRAGKIVVNLTGRLNKLVS 247
IG FE++DDHRAGKIV NL+ ++ ++ S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3
Query: 360 FLTVMMKHGYIGXFEIVDDHRAGKIVVNLTGRLNK 256
F+TV MK G FEIVD+ G+I V+L G LNK
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -3
Query: 456 NVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEI 313
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 33.9 bits (74), Expect = 3.9
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 450 LSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGKIVVNLT 271
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 270 GRLNKLVSFXLVLM-FPSTILK 208
NK+V+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -3
Query: 450 LSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXF 319
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 33.5 bits (73), Expect = 5.1
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = -3
Query: 450 LSDALKSIXNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGXFEIVDDHRAGKIV 283
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 282 VNLTGRLNKLVSFXLVLMFPSTILKDGLIC 193
+ +N L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 558 SLAVVLQRRDXENPGVTQLNRLAAHPPFASWRNSE 662
SL ++ RRD ENP Q+N++ AH P ++ E
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSPLNGFKTIE 37
>UniRef50_A1UFD6 Cluster: Amidohydrolase 2; n=25;
Actinomycetales|Rep: Amidohydrolase 2 - Mycobacterium
sp. (strain KMS)
Length = 409
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 495 YEARAKSXPMVRMNVLSDALKSIXNAEKRGKRQVLIRP 382
YE R S P++ ++V+ AL+ + +RG + VL+RP
Sbjct: 156 YEGRIFSTPVINLSVVDRALEELEWCLERGAKTVLVRP 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,206,797
Number of Sequences: 1657284
Number of extensions: 10553769
Number of successful extensions: 21751
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 21288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21737
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -