Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30554.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 139 8e-33
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 139 8e-33
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 139 8e-33
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 139 8e-33
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 139 8e-33
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 139 8e-33
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 139 8e-33
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 138 2e-32
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 105 2e-22
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 0.003
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 79.0 bits (186), Expect = 2e-14
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 139 bits (337), Expect = 8e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 138 bits (334), Expect = 2e-32
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 105 bits (252), Expect = 2e-22
Identities = 54/71 (76%), Positives = 58/71 (81%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGXFEIVDDHRAGK 289
MVRMNVL+DALKSI NAEKRGKR+ L+ LTVMMKHGYIG FEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 288 IVVNLTGRLNK 256
IVVNLTGRLNK
Sbjct: 60 IVVNLTGRLNK 70
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRK 116
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRK
Sbjct: 72 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 118
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -3
Query: 468 MVRMNVLSDALKSIXNAEKRGKRQVLIRPCSKVIVKF 358
MV MNVL+ ALKSI N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,547,114
Number of Sequences: 237096
Number of extensions: 1633037
Number of successful extensions: 5997
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5987
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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