Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30547.Seq
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ386730-1|ABD46888.1|  301|Homo sapiens cardiolipin synthase pr...   109   8e-24
AL035461-9|CAB55278.1|  301|Homo sapiens cardiolipin synthase 1 ...   109   8e-24
AF241784-1|AAG44472.1|  301|Homo sapiens CAPTase-iso protein.         109   8e-24
BC069010-1|AAH69010.1|  205|Homo sapiens CRLS1 protein protein.        87   6e-17

>DQ386730-1|ABD46888.1|  301|Homo sapiens cardiolipin synthase
           protein.
          Length = 301

 Score =  109 bits (263), Expect = 8e-24
 Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = -1

Query: 517 YLS-TWQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTF 341
           Y+S T+ DLIP+ LT +I+ RD+ L+ A F +RY +LP PRTL++YF+  +ATA+L PTF
Sbjct: 181 YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF 240

Query: 340 ISKVNTAVQLLLVGTTLASPVFGYVD 263
           ISKVNTAVQL+LV  +LA+PVF Y D
Sbjct: 241 ISKVNTAVQLILVAASLAAPVFNYAD 266



 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 38/76 (50%), Positives = 58/76 (76%)
 Frame = -2

Query: 735 PNHLYVSPGMAMSPYLGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFL 556
           PN L ++  + ++P LGY+I   ++N+ALG+   AG+TDLLDG+IARNW  Q + +GS L
Sbjct: 110 PNMLSMTR-IGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 168

Query: 555 DPMADKVLVATLFISL 508
           DP+ADK+L++ L++SL
Sbjct: 169 DPLADKILISILYVSL 184


>AL035461-9|CAB55278.1|  301|Homo sapiens cardiolipin synthase 1
           protein.
          Length = 301

 Score =  109 bits (263), Expect = 8e-24
 Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = -1

Query: 517 YLS-TWQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTF 341
           Y+S T+ DLIP+ LT +I+ RD+ L+ A F +RY +LP PRTL++YF+  +ATA+L PTF
Sbjct: 181 YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF 240

Query: 340 ISKVNTAVQLLLVGTTLASPVFGYVD 263
           ISKVNTAVQL+LV  +LA+PVF Y D
Sbjct: 241 ISKVNTAVQLILVAASLAAPVFNYAD 266



 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 38/76 (50%), Positives = 58/76 (76%)
 Frame = -2

Query: 735 PNHLYVSPGMAMSPYLGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFL 556
           PN L ++  + ++P LGY+I   ++N+ALG+   AG+TDLLDG+IARNW  Q + +GS L
Sbjct: 110 PNMLSMTR-IGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 168

Query: 555 DPMADKVLVATLFISL 508
           DP+ADK+L++ L++SL
Sbjct: 169 DPLADKILISILYVSL 184


>AF241784-1|AAG44472.1|  301|Homo sapiens CAPTase-iso protein.
          Length = 301

 Score =  109 bits (263), Expect = 8e-24
 Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = -1

Query: 517 YLS-TWQDLIPISLTLLIVGRDIALVVAGFVIRYISLPPPRTLSRYFDVTHATAQLAPTF 341
           Y+S T+ DLIP+ LT +I+ RD+ L+ A F +RY +LP PRTL++YF+  +ATA+L PTF
Sbjct: 181 YVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPCYATARLKPTF 240

Query: 340 ISKVNTAVQLLLVGTTLASPVFGYVD 263
           ISKVNTAVQL+LV  +LA+PVF Y D
Sbjct: 241 ISKVNTAVQLILVAASLAAPVFNYAD 266



 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 38/76 (50%), Positives = 58/76 (76%)
 Frame = -2

Query: 735 PNHLYVSPGMAMSPYLGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFL 556
           PN L ++  + ++P LGY+I   ++N+ALG+   AG+TDLLDG+IARNW  Q + +GS L
Sbjct: 110 PNMLSMTR-IGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 168

Query: 555 DPMADKVLVATLFISL 508
           DP+ADK+L++ L++SL
Sbjct: 169 DPLADKILISILYVSL 184


>BC069010-1|AAH69010.1|  205|Homo sapiens CRLS1 protein protein.
          Length = 205

 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 38/76 (50%), Positives = 58/76 (76%)
 Frame = -2

Query: 735 PNHLYVSPGMAMSPYLGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFL 556
           PN L ++  + ++P LGY+I   ++N+ALG+   AG+TDLLDG+IARNW  Q + +GS L
Sbjct: 110 PNMLSMTR-IGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 168

Query: 555 DPMADKVLVATLFISL 508
           DP+ADK+L++ L++SL
Sbjct: 169 DPLADKILISILYVSL 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,152,955
Number of Sequences: 237096
Number of extensions: 2274824
Number of successful extensions: 6641
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6641
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)