Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30547.Seq
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase fam... 52 3e-07
At3g55030.1 68416.m06111 phosphatidylglycerolphosphate synthase,... 47 2e-05
At2g39290.1 68415.m04824 phosphatidylglycerolphosphate synthase ... 45 5e-05
At1g68000.1 68414.m07768 CDP-diacylglycerol--inositol 3-phosphat... 34 0.12
At4g38570.1 68417.m05460 CDP-diacylglycerol--inositol 3-phosphat... 32 0.35
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 30 1.9
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 30 1.9
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 29 4.3
At1g78980.1 68414.m09209 leucine-rich repeat transmembrane prote... 28 7.6
At2g27035.1 68415.m03248 plastocyanin-like domain-containing pro... 27 10.0
>At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase family
protein similar to SP|Q07560 Cardiolipin synthetase (EC
2.7.8.-) {Saccharomyces cerevisiae; contains Pfam
profile PF01066: CDP-alcohol phosphatidyltransferase
Length = 341
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = -2
Query: 708 MAMSPYLGYVITXNNYNLA-LGLLVSAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVL 532
+ P L ++I+ Y+ A LGL VS G +D LDG++AR K S +GS+LDP+ADKVL
Sbjct: 153 LVSGPVLWWMISNEMYSSAFLGLAVS-GASDWLDGYVARRMKINSV-VGSYLDPLADKVL 210
Query: 531 VATLFISLL 505
+ + ++++
Sbjct: 211 IGCVAVAMV 219
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -1
Query: 502 QDLIPISLTLLIVGRDIALVVAGFVIRYISLPPP-RTLSRYFDVTHATAQ-LAPTFISKV 329
+DL+ L +++ RD+ALV +R ++L +T S +F++ ++ Q + P FISKV
Sbjct: 221 KDLLHPGLVGIVLLRDVALVGGAVYLRALNLDWKWKTWSDFFNLDGSSPQKVEPLFISKV 280
Query: 328 NTAVQLLLVGTTLASPVFGYVD 263
NT QL LV + P FG D
Sbjct: 281 NTVFQLTLVAGAILQPEFGNPD 302
>At3g55030.1 68416.m06111 phosphatidylglycerolphosphate synthase,
putative similar to phosphatidylglycerolphosphate
synthase GI:13365519 from [Arabidopsis thaliana];
contains non-consensus CG acceptor splice site at exon 4
Length = 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = -2
Query: 645 LLVSAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 508
+ ++A ITD LDG+IAR + ++ G+FLDP+ADK++VA I L
Sbjct: 76 IFIAAAITDWLDGYIARKMR-LGSEFGAFLDPVADKLMVAATLILL 120
>At2g39290.1 68415.m04824 phosphatidylglycerolphosphate synthase
(PGS1) identical to phosphatidylglycerolphosphate
synthase GI:13365519 from [Arabidopsis thaliana]
Length = 296
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = -2
Query: 645 LLVSAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFISL 508
+ ++A ITD LDG++AR + S G+FLDP+ADK++VA I L
Sbjct: 140 IFIAAAITDWLDGYLARKMRLGSA-FGAFLDPVADKLMVAATLILL 184
>At1g68000.1 68414.m07768 CDP-diacylglycerol--inositol
3-phosphatidyltransferase / phosphatidylinositol
synthase (PIS1) identical to phosphatidylinositol
synthase (PIS1) GB:AJ000539 [gi:3367632]
Length = 227
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 690 LGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFIS 511
+ + + +N L L + D +DGW+AR + ST G+ LD + D+V A L +
Sbjct: 32 VAFAVCFSNKPLFSVLYFFSFCCDAVDGWVARRFNQVST-FGAVLDMVTDRVSTACLLVI 90
Query: 510 L 508
L
Sbjct: 91 L 91
>At4g38570.1 68417.m05460 CDP-diacylglycerol--inositol
3-phosphatidyltransferase, putative /
phosphatidylinositol synthase, putative similar to
phosphatidylinositol synthase (PIS1) - Arabidopsis
thaliana, PID:e1313354 [gi:3367632]
Length = 225
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -2
Query: 690 LGYVITXNNYNLALGLLVSAGITDLLDGWIARNWKGQSTKMGSFLDPMADKVLVATLFIS 511
+ + + +N L L + D +DGW AR + ST G+ LD + D+V A L +
Sbjct: 29 IAFSVCFSNKTLFSLLYFFSFCCDAVDGWCARKFNQVST-FGAVLDMVTDRVSTACLLVI 87
Query: 510 L 508
L
Sbjct: 88 L 88
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 21 LIIYLHYFV*LIK*TVLLMVNKILKTIKNNLEMGIEIFHNTSRYSYFF 164
L++ +YFV + K L+M I T+ MGI+I H S S F
Sbjct: 536 LLMKRNYFVYIFKTAQLVMAAFITMTVFIRTRMGIDIIHGNSYMSALF 583
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 344 SRCKLCGCVCYIEIPTQRSRWW*AYISNDKSSHN 445
S C +CG + T R+ WW A ++ +S HN
Sbjct: 214 SACHICGSQAWQTNDTSRNVWWLALLTMGESWHN 247
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 285 PQFLVMLIIQLESLVWNYCSL 223
PQ LV L ++L+ L WNYC L
Sbjct: 577 PQGLVYLPLKLKLLKWNYCPL 597
>At1g78980.1 68414.m09209 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich repeat
transmembrane protein kinase 2 GI:3360291 from [Zea
mays]
Length = 693
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 412 LPPPRTLSRYFDVTHATAQLAPTFISKVNTAVQLLL 305
L PP++LSR+ D+ Q+ P F ++ V+ L+
Sbjct: 632 LYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALV 667
>At2g27035.1 68415.m03248 plastocyanin-like domain-containing
protein low similarity to SP:P80728 Mavicyanin
{Cucurbita pepo}; contains Pfam profile PF02298:
Plastocyanin-like domain
Length = 163
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +3
Query: 336 LIKVGASCAVACVTSKYLLNVRGGGKLIYRMTNP 437
+++V S CV + Y+ N+ GG+ ++++ P
Sbjct: 69 ILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEP 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,812,566
Number of Sequences: 28952
Number of extensions: 316507
Number of successful extensions: 670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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