Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30545.Seq
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p pro...    69   9e-12
AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA...    69   9e-12
X64735-1|CAA46001.1|  352|Drosophila melanogaster Wnt-2 protein ...    29   8.9  
BT003204-1|AAO24959.1|  352|Drosophila melanogaster RE36604p pro...    29   8.9  
AE013599-871|AAF58933.1|  352|Drosophila melanogaster CG1916-PA ...    29   8.9  

>AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p
           protein.
          Length = 767

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 257 VIELTRIIDQSSSTKDLQTIFPQLINNIFSSSFST-GWDLKSITCDVNRYEFEALISFLE 433
           V EL+ + D+ S  + +Q IFP ++++IF    +  GW L++ T + N  +F+ L  F  
Sbjct: 26  VHELSILFDRCS-LRQVQEIFPHVVHSIFGIDGNPLGWGLRTTTLENNPVQFQTLHQFFG 84

Query: 434 PQGPMFRLCYRLLSDTQLKYELPLNYYLLIYR*H*KEGDAHNFMADMLTADAQTMNMDFF 613
             GP+  +C+RLL D Q K+EL +N     +    + G   +F A+++  +     +   
Sbjct: 85  VCGPLMHVCHRLLVD-QYKFELDINLLPAKFVSLLQNGQNPSFYAELINVETMMHQVSTL 143

Query: 614 GTQSFDYYIFNF 649
              +FD+Y+ +F
Sbjct: 144 SLNAFDFYVIHF 155


>AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA
           protein.
          Length = 767

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
 Frame = +2

Query: 257 VIELTRIIDQSSSTKDLQTIFPQLINNIFSSSFST-GWDLKSITCDVNRYEFEALISFLE 433
           V EL+ + D+ S  + +Q IFP ++++IF    +  GW L++ T + N  +F+ L  F  
Sbjct: 26  VHELSILFDRCS-LRQVQEIFPHVVHSIFGIDGNPLGWGLRTTTLENNPVQFQTLHQFFG 84

Query: 434 PQGPMFRLCYRLLSDTQLKYELPLNYYLLIYR*H*KEGDAHNFMADMLTADAQTMNMDFF 613
             GP+  +C+RLL D Q K+EL +N     +    + G   +F A+++  +     +   
Sbjct: 85  VCGPLMHVCHRLLVD-QYKFELDINLLPAKFVSLLQNGQNPSFYAELINVETMMHQVSTL 143

Query: 614 GTQSFDYYIFNF 649
              +FD+Y+ +F
Sbjct: 144 SLNAFDFYVIHF 155


>X64735-1|CAA46001.1|  352|Drosophila melanogaster Wnt-2 protein
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 575 TCQP*NCGHLPLS-NVTCRSRGNNLMAIRTSTECQ 474
           TCQ    GH P S ++ C  RG+N   IR +T+C+
Sbjct: 296 TCQ--RTGHGPQSCDLLCCGRGHNTQHIRRTTQCR 328


>BT003204-1|AAO24959.1|  352|Drosophila melanogaster RE36604p
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 575 TCQP*NCGHLPLS-NVTCRSRGNNLMAIRTSTECQ 474
           TCQ    GH P S ++ C  RG+N   IR +T+C+
Sbjct: 296 TCQ--RTGHGPQSCDLLCCGRGHNTQHIRRTTQCR 328


>AE013599-871|AAF58933.1|  352|Drosophila melanogaster CG1916-PA
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 575 TCQP*NCGHLPLS-NVTCRSRGNNLMAIRTSTECQ 474
           TCQ    GH P S ++ C  RG+N   IR +T+C+
Sbjct: 296 TCQ--RTGHGPQSCDLLCCGRGHNTQHIRRTTQCR 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,048,287
Number of Sequences: 53049
Number of extensions: 575522
Number of successful extensions: 853
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)