Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30544.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.9  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.4  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       23   7.6  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 SRAGIWTLPPALFCLYSPILSKN 306
           S   IW+LP  LFC  S + S N
Sbjct: 179 STNNIWSLPDHLFCSLSGLRSLN 201


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 270 RGWQSPDASP 241
           RGW SP ASP
Sbjct: 553 RGWSSPQASP 562


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 498 FSFSLLLYVNFTVKTECSW 442
           + F++L Y   T+KT  SW
Sbjct: 26  YGFAVLDYSTLTIKTHDSW 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,464
Number of Sequences: 2352
Number of extensions: 8641
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)