Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30543.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          25   2.3  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          25   2.3  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          25   2.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.2  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   9.2  

>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 251 SLKKYVLIFININFTT 298
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 251 SLKKYVLIFININFTT 298
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 251 SLKKYVLIFININFTT 298
           SL++Y+L+F+NI F T
Sbjct: 3   SLRRYILLFLNICFYT 18


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 455 HFLYITLFLSRCIGS 499
           +FLYIT+F++  IG+
Sbjct: 140 YFLYITIFVTAVIGN 154


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 693 PMIPSVXLPRRHIHYPICMVRRFFKFSPDFNNSRSILAGCSGSLSMNCDSNS 538
           P +P V   R +       +RR+   SP        LAGCSG +S    +NS
Sbjct: 29  PFVPPVGF-RYNRRLRTARLRRYIFQSPPRAVRVRQLAGCSGYVSPRGGTNS 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,314
Number of Sequences: 2352
Number of extensions: 9614
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)