Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30543.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025189-1|ABF17880.1|  479|Drosophila melanogaster FI01305p pro...    36   0.053
BT012321-1|AAS77446.1|  421|Drosophila melanogaster AT27170p pro...    36   0.053
AY069482-1|AAL39627.1|  447|Drosophila melanogaster LD21722p pro...    36   0.053
AF017096-4|AAC39086.1|  483|Drosophila melanogaster protein ( Dr...    36   0.053
AE014297-668|AAF54162.1|  479|Drosophila melanogaster CG2670-PA ...    36   0.053

>BT025189-1|ABF17880.1|  479|Drosophila melanogaster FI01305p
           protein.
          Length = 479

 Score = 35.9 bits (79), Expect = 0.053
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = +2

Query: 539 ELESQFILKLPEHPAKILRELLKSGENLKNRLTIQ 643
           ELESQFI+++P+  A  + E + +G  +K+RLTIQ
Sbjct: 54  ELESQFIMRVPKELADTVHEAINAG-TIKDRLTIQ 87


>BT012321-1|AAS77446.1|  421|Drosophila melanogaster AT27170p
           protein.
          Length = 421

 Score = 35.9 bits (79), Expect = 0.053
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = +2

Query: 539 ELESQFILKLPEHPAKILRELLKSGENLKNRLTIQ 643
           ELESQFI+++P+  A  + E + +G  +K+RLTIQ
Sbjct: 54  ELESQFIMRVPKELADTVHEAINAG-TIKDRLTIQ 87


>AY069482-1|AAL39627.1|  447|Drosophila melanogaster LD21722p
           protein.
          Length = 447

 Score = 35.9 bits (79), Expect = 0.053
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = +2

Query: 539 ELESQFILKLPEHPAKILRELLKSGENLKNRLTIQ 643
           ELESQFI+++P+  A  + E + +G  +K+RLTIQ
Sbjct: 22  ELESQFIMRVPKELADTVHEAINAG-TIKDRLTIQ 55


>AF017096-4|AAC39086.1|  483|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 483

 Score = 35.9 bits (79), Expect = 0.053
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = +2

Query: 539 ELESQFILKLPEHPAKILRELLKSGENLKNRLTIQ 643
           ELESQFI+++P+  A  + E + +G  +K+RLTIQ
Sbjct: 54  ELESQFIMRVPKELADTVHEAINAG-TIKDRLTIQ 87


>AE014297-668|AAF54162.1|  479|Drosophila melanogaster CG2670-PA
           protein.
          Length = 479

 Score = 35.9 bits (79), Expect = 0.053
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = +2

Query: 539 ELESQFILKLPEHPAKILRELLKSGENLKNRLTIQ 643
           ELESQFI+++P+  A  + E + +G  +K+RLTIQ
Sbjct: 54  ELESQFIMRVPKELADTVHEAINAG-TIKDRLTIQ 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,731,256
Number of Sequences: 53049
Number of extensions: 388965
Number of successful extensions: 1422
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)