Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30540.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.3  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.7  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 101 GPPKGIPALKAHIIANKIDVALWGVRV 181
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 151 NRRSSLGGPRNHRAVYHWIRV 213
           N R    GPR   AVY  +R+
Sbjct: 179 NIRLKRAGPRTESAVYEPVRI 199


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 551 MFRDWNSTRDDEQTTTH 501
           ++ DW+   DDEQ   H
Sbjct: 306 LYSDWDYFWDDEQQVPH 322


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 551 MFRDWNSTRDDEQTTTH 501
           ++ DW+   DDEQ   H
Sbjct: 307 LYSDWDYFWDDEQQVPH 323


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 551 MFRDWNSTRDDEQTTTH 501
           ++ DW+   DDEQ   H
Sbjct: 307 LYSDWDYFWDDEQQVPH 323


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 204  PMVHSTVITRTPQRATS 154
            P VHS+ +   PQ +T+
Sbjct: 1797 PSVHSSTVVPPPQHSTT 1813


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFXFALLH 450
           + + LFY  +  +V  NL   VP+   AL H
Sbjct: 170 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFXFALLH 450
           + + LFY  +  +V  NL   VP+   AL H
Sbjct: 126 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,038
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)