Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30538.Seq
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 104 2e-26
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 89 2e-18
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 79 4e-15
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 79 4e-15
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 73 1e-13
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 73 2e-13
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 72 3e-13
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 67 1e-11
10_08_0620 - 19321612-19323237 57 9e-09
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 56 3e-08
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 54 7e-08
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 36 0.032
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 35 0.057
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 34 0.075
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 34 0.075
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 33 0.13
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 32 0.40
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 28 4.9
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 104 bits (249), Expect(2) = 2e-26
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
++ LE EHPAAKVLVELA+LQD EVGDGTTSVVIIAAELLK ++LV+ KIHPTSIISGY
Sbjct: 19 LRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGY 78
Query: 427 RL 432
RL
Sbjct: 79 RL 80
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 491 LGRXVSINTAKTTMSSXLIGADADFFSEMVVDAAQ 595
LG+ IN AKT+MSS LI +D+DFF+ +VVDA Q
Sbjct: 128 LGKDSLINCAKTSMSSKLINSDSDFFANLVVDAVQ 162
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 194 MLVDDIGDVTVTNDGATILK 253
MLVDDIGDVT+TNDGATIL+
Sbjct: 1 MLVDDIGDVTITNDGATILR 20
Score = 32.3 bits (70), Expect(2) = 2e-26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 424 YRLACKEAVKYIQDNLTVTVESLGQXRL 507
Y+LA +EA KY+++ L V V+ LG+ L
Sbjct: 106 YQLAMREACKYVEEKLAVKVDKLGKDSL 133
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/86 (47%), Positives = 64/86 (74%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+K L ++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+GY
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGY 123
Query: 427 RLACKEAVKYIQDNLTVTVESLGQXR 504
R+A + A + + E++ + R
Sbjct: 124 RMAVECARNALLERTMDNKENIDKFR 149
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Frame = +2
Query: 137 AAAIANIVKXSLGPVGLDKMLVDDIG---DVTVTNDGATILKS 256
A AIA++VK +LGP G+DK+L G VTVTNDGATILKS
Sbjct: 25 AMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKS 66
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 509 INTAKTTMSSXLIGADADFFSEMVVDA 589
+N A TT+SS ++ D ++F+E+ VDA
Sbjct: 153 MNIAMTTLSSKILSQDKEYFAELAVDA 179
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/80 (46%), Positives = 57/80 (71%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
++ L+ HPAAK+LV++A+ QD EVGDGTT+VV++AAE LK A ++ +HP S+I Y
Sbjct: 69 MRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSY 128
Query: 427 RLACKEAVKYIQDNLTVTVE 486
R A A++ ++D L ++E
Sbjct: 129 RTAGHLAIEKVKD-LATSIE 147
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +2
Query: 146 IANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
+A+ V+ +LGP G+DK++ DD G T++NDGATI++
Sbjct: 35 VADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMR 70
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 518 AKTTMSSXLIGADADFFSEMVVDA 589
A TT+SS LIG + +FF+ MVVDA
Sbjct: 162 AATTLSSKLIGGEKEFFASMVVDA 185
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/58 (58%), Positives = 50/58 (86%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 420
+K L ++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Frame = +2
Query: 143 AIANIVKXSLGPVGLDKMLVDDIG---DVTVTNDGATILKS 256
AI+++VK +LGP G+DK+L G VTVTNDGATILKS
Sbjct: 28 AISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKS 67
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 509 INTAKTTMSSXLIGADADFFSEMVVDA 589
+N A TT+SS ++ D ++F+ + VDA
Sbjct: 130 MNIAMTTLSSKILSQDKEYFAGLAVDA 156
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+++L+ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A + HPT I Y
Sbjct: 67 LRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAY 126
Query: 427 RLACKEAVKYIQDNLTVTVE 486
A +A+ + D + + V+
Sbjct: 127 TKALDDALS-VLDKIAIPVD 145
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 137 AAAIANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
A A+A+I++ +LGP + KML+D G + VTNDG IL+
Sbjct: 30 AKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILR 68
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+ +LE +HPAAK+LV + Q EE+GDG + A ELL+ A+EL++ +HP+ II GY
Sbjct: 68 VNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGY 127
Query: 427 RLACKEAVKYIQD 465
A + V+ ++D
Sbjct: 128 TKAINKTVEILED 140
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 146 IANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATIL 250
++ I + SLGP G++KM+++ + + VTND ATI+
Sbjct: 34 LSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/80 (40%), Positives = 54/80 (67%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+++++ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A+ + HPT I Y
Sbjct: 67 LREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAY 126
Query: 427 RLACKEAVKYIQDNLTVTVE 486
A ++A+ + D + + V+
Sbjct: 127 TKALEDALA-VLDKIAMHVD 145
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 137 AAAIANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
A A+A+I++ +LGP + KML+D G + VTNDG IL+
Sbjct: 30 AKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILR 68
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/72 (40%), Positives = 51/72 (70%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+++++ ++ AK++VEL+ QD E+GDGTT VV++A LL+ A++L++ IHP I GY
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGY 133
Query: 427 RLACKEAVKYIQ 462
LA + A +++
Sbjct: 134 ELASRIAFDHLE 145
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2
Query: 143 AIANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
A+A I++ SLGP G+DKML GDVT+TNDGATIL+
Sbjct: 39 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE 75
>10_08_0620 - 19321612-19323237
Length = 541
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+ ++ PAA++L +L++ QD GDGTT+VV++A LL+ A L+ HPT+
Sbjct: 76 LSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADAL 135
Query: 427 RLACKEAVKYIQDNLTVTVE 486
L AV+ + + + VE
Sbjct: 136 HLLAARAVEVLH-GMAIPVE 154
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +2
Query: 143 AIANIVKXSLGPVGLDKMLVDDI--GD--VTVTNDGATIL 250
A+A + SLGP G+DKM+ GD V +TNDGATIL
Sbjct: 37 AVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATIL 76
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG- 423
+ ++ PAA++L EL++ QD GDGTT+VV++A LL+ A L+ HPT+
Sbjct: 72 LSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADAL 131
Query: 424 YRLACK 441
+RLA +
Sbjct: 132 HRLATR 137
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 137 AAAIANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILKSWKXSILLP 280
A A+A+ V+ SLGP G+DKM+ +V +TNDGATIL + S+L P
Sbjct: 35 ARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILS--RMSLLQP 80
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +1
Query: 247 IKKLEXEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 426
+K+++ ++P A ++ A QD+ GDGTTS V+ EL+K ++ + HP ++ G+
Sbjct: 63 LKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGF 122
Query: 427 RLACKEAVKYIQDNLTVTV 483
+A + +++++ T V
Sbjct: 123 DVAKRATLEFLEKFKTSVV 141
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 137 AAAIANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
A + +++K +LGP G KMLV GD+ +T DG T+LK
Sbjct: 26 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLK 64
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 250 KKLEXEHPA----AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSII 417
K++E E P AK++ + A ++ GDGTT+ V++A ++ ++V +P I
Sbjct: 110 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQIT 169
Query: 418 SGYRLACKEAVKYIQ 462
G K V +Q
Sbjct: 170 RGIEKTAKALVSELQ 184
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 146 IANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
+A++V +LGP G + +L G + NDG T+ K
Sbjct: 75 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK 110
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 265 EHPAAKVLVE----LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRL 432
EH A +L E +A + VGDGTT+ +I+A E++ V T +P ++ G
Sbjct: 625 EHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILAREIINLGLLAVATGANPVALRKGIDK 684
Query: 433 ACKEAV 450
A E +
Sbjct: 685 AVHELI 690
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 265 EHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKE 444
E+ AK++ + A ++ GDGTT+ V++A L+ ++V +P I G K
Sbjct: 123 ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKA 182
Query: 445 AVKYIQ 462
V+ ++
Sbjct: 183 LVEELK 188
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 146 IANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILK 253
+A++V +LGP G + +L G + NDG T+ +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAR 114
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 265 EHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 423
E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P SI G
Sbjct: 107 ENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 159
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 265 EHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 423
E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P S+ G
Sbjct: 102 ENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKG 154
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 146 IANIVKXSLGPVGLDKMLVDDIGDVTVTNDGATILKSWKXS 268
+A+ VK ++GP G ++ G VT DG T+ KS + S
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFS 132
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 352 AAELLKNADELVKTKIHPTSIISGYRLACK 441
AAEL + E + +++ P SI++G R ACK
Sbjct: 6 AAELPDDIVEKIISRLPPRSIVTGCRAACK 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,379,831
Number of Sequences: 37544
Number of extensions: 248862
Number of successful extensions: 604
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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