Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30538.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.35 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.35 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    27   0.35 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   1.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.4  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   7.5  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   7.5  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   7.5  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   7.5  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.9  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   9.9  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 200 VDDIGDVTVTNDGATILKSWK 262
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 200 VDDIGDVTVTNDGATILKSWK 262
           +DD  + T+TND AT+++ WK
Sbjct: 34  MDDALNTTLTNDKATLIQVWK 54


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 200 VDDIGDVTVTNDGATILKSWK 262
           +DD  + T+TND AT+++ WK
Sbjct: 12  MDDALNTTLTNDKATLIQVWK 32


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 468 PHSNSRVTWAGPSLSTQPKQP 530
           PH  SR T   P   T P+QP
Sbjct: 384 PHQQSRPTIPAPQQQTPPRQP 404


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 126 ILCSHWVSAGSCPCXRQRXSYSRHFLLYF*HKIHFKIAVT 7
           ++C  +     CP  R R +Y+R   L    + HF   +T
Sbjct: 125 VVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLT 164


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 145 YSKHSKEXPWASWSG 189
           Y+  SK  PW  W+G
Sbjct: 583 YTHRSKGNPWPRWTG 597


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 145 YSKHSKEXPWASWSG 189
           Y+  SK  PW  W+G
Sbjct: 583 YTHRSKGNPWPRWTG 597


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 145 YSKHSKEXPWASWSG 189
           Y+  SK  PW  W+G
Sbjct: 469 YTHRSKGNPWPRWTG 483


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription
          factor Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 81 RQRXSYSRHFLLYF*HKIHFKIAVT 7
          RQR +Y+RH +L    + H+   +T
Sbjct: 3  RQRTAYTRHQILELEKEFHYNXYLT 27


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 148 YSRCWPLHFVFSLGLRR 98
           YS C+  +++FSLGL++
Sbjct: 43  YSACYVGNYLFSLGLQQ 59


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 436 CKEAVKYIQDNLTVTVESLGQXRLYQHSQNNHVI 537
           C+  V ++Q+N    V    Q   Y+ +  NH+I
Sbjct: 304 CEINVTWLQENAVEKVNIKPQVDRYRLANGNHII 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,517
Number of Sequences: 2352
Number of extensions: 9664
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)