Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30536.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep: CG97... 101 1e-20
UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic... 92 1e-17
UniRef50_O00303 Cluster: Eukaryotic translation initiation facto... 59 7e-08
UniRef50_O04202 Cluster: Eukaryotic translation initiation facto... 50 4e-05
UniRef50_A1Z6K7 Cluster: CG8335-PA; n=1; Drosophila melanogaster... 46 5e-04
UniRef50_Q54C49 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=... 46 7e-04
UniRef50_Q5DDP2 Cluster: SJCHGC06192 protein; n=1; Schistosoma j... 45 0.001
UniRef50_Q4PI88 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A7AT42 Cluster: Mov34/MPN/PAD-1 family protein; n=3; Pi... 41 0.025
UniRef50_Q6C4H1 Cluster: Similar to tr|Q9P748 Neurospora crassa ... 40 0.034
UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n... 38 0.14
UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit, puta... 38 0.18
UniRef50_A5K6P8 Cluster: Eukaryotic translation initiation facto... 38 0.18
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 37 0.31
UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, wh... 37 0.31
UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle non-... 36 0.96
UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory su... 36 0.96
UniRef50_Q9C5Z2 Cluster: Eukaryotic translation initiation facto... 36 0.96
UniRef50_UPI000058941E Cluster: PREDICTED: hypothetical protein;... 35 1.3
UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8; Fungi... 35 1.3
UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory su... 35 1.3
UniRef50_Q18967 Cluster: Putative uncharacterized protein eif-3.... 34 2.2
UniRef50_Q5KER5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;... 33 3.9
UniRef50_Q5CYT6 Cluster: EIF3-p47 with JAB/PAD domain; n=2; Cryp... 33 5.1
UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subun... 33 5.1
UniRef50_A2DZC5 Cluster: Mov34/MPN/PAD-1 family protein; n=1; Tr... 33 6.7
UniRef50_A7Q0N3 Cluster: Chromosome chr7 scaffold_42, whole geno... 32 8.9
UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like metallop... 32 8.9
>UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep:
CG9769-PA - Drosophila melanogaster (Fruit fly)
Length = 280
Score = 101 bits (243), Expect = 1e-20
Identities = 50/95 (52%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWWGXAMK*PTXPL 286
DKGVVEVTN FCVPHKEH DQV AEL+YA+D+Y LNR+VNS+ES+VGWW
Sbjct: 41 DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSS 100
Query: 287 LYTSIIPVNAVSLSMXXCDTSXGGGRMGLRG-ICL 388
+ + DTS GGRMGLR +C+
Sbjct: 101 VIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCI 135
Score = 82.2 bits (194), Expect = 8e-15
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIGH-ERQRSGGSNQLXLRATQRTCRSSXS 177
++V+VHPVVLFQ+VDA+ERRNADSHRVIG L+G ++ +N + + +
Sbjct: 6 LTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65
Query: 178 GT*LRDGCLXAEQKSQFL*KYCWLVGXGNEVTNXSSVIHEYYSRECREPVH 330
+ D +K GN+VTN SSVIHEYY+REC PVH
Sbjct: 66 LSYALD-MYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVH 115
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 396 LGVPNGKQGXMFXPXDVXLTCYEPEIVGLQVCQKTVSGEVAGR-AALPGARTWAQVMSAA 572
LGVP GK G MF P V LT YEPE GL++ QKTV A R +P AQ+ A+
Sbjct: 137 LGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEAS 196
Query: 573 SPXSAXL 593
+ + L
Sbjct: 197 TKLQSLL 203
>UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 5 epsilon-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to eukaryotic translation initiation factor 3
subunit 5 epsilon-like protein - Nasonia vitripennis
Length = 311
Score = 91.9 bits (218), Expect = 1e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+KGVVEVTN FCVPHKE+ DQV AELNYAMD+Y LNRRVN E+IVGWW
Sbjct: 40 EKGVVEVTNCFCVPHKEYEDQVDAELNYAMDLYELNRRVNPQENIVGWW 88
Score = 78.6 bits (185), Expect = 1e-13
Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGH-ERQRSGGSNQLXLRATQRTCRSSXSGT 183
VKVHPVVLFQIVDAYERRNA++HRVIG L+G E+ +N + + +
Sbjct: 7 VKVHPVVLFQIVDAYERRNAEAHRVIGTLLGTVEKGVVEVTNCFCVPHKEYEDQVDAELN 66
Query: 184 *LRDGC-LXAEQKSQFL*KYCWLVGXGNEVTNXSSVIHEYYSRECREPVH 330
D L Q W GNEVTN S VIHEYY+REC P+H
Sbjct: 67 YAMDLYELNRRVNPQENIVGWW--ATGNEVTNHSFVIHEYYARECNNPIH 114
Score = 59.3 bits (137), Expect = 7e-08
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +3
Query: 396 LGVPNGKQGXMFXPXDVXLTCYEPEIVGLQVCQKTVSGEVAGRAA--LPGARTWAQVMSA 569
LGVPNG G MF P V + CY+PE++GLQ+C KT++ +G+ + + AQ+ A
Sbjct: 137 LGVPNGNTGCMFTPAKVQVQCYDPEVIGLQLCAKTIAQAQSGKTSGIVEPMMDLAQIAEA 196
Query: 570 ASPXSAXL 593
+S ++ L
Sbjct: 197 SSKLASML 204
>UniRef50_O00303 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=38; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 5 - Homo sapiens (Human)
Length = 357
Score = 59.3 bits (137), Expect = 7e-08
Identities = 31/98 (31%), Positives = 49/98 (50%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWWGXAMK*PTXPL 286
DK VEVTN F VPH E D+V ++ +A ++Y L+++V+ +E I+GW+ +
Sbjct: 125 DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSV 184
Query: 287 LYTSIIPVNAVSLSMXXCDTSXGGGRMGLRGICLCTIG 400
L A + DTS GRM ++ +G
Sbjct: 185 LIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMG 222
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGH-ERQRSGGSNQLXLRATQRTCRSSXSGT 183
V++HPV+L IVD+YERRN + RVIG L+G ++ +N + + +
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 184 *LRDGCLXAEQKSQFL*KYCWLVGXGNEVTNXSSVIHEYYSRECREPVH 330
++ ++ S W G+++T S +IHEYYSRE P+H
Sbjct: 152 FAKNMYELHKKVSPNELILGW-YATGHDITEHSVLIHEYYSREAPNPIH 199
>UniRef50_O04202 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=7; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 293
Score = 50.0 bits (114), Expect = 4e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 113 GVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
G V++ N + VPH E +DQV +++Y ++ + +VNS E+IVGW+
Sbjct: 64 GTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWY 110
Score = 40.3 bits (90), Expect = 0.034
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLXLRATQRTCRSSXSG 180
++ ++HP+V+F + D + RR + RVIG L+G G + A S
Sbjct: 26 LTARIHPLVIFNVCDCFVRRPDSAERVIGTLLG-SILPDGTVDIRNSYAVPHNESSDQVA 84
Query: 181 T*L--RDGCLXAEQKSQFL*KYCWLVGXGNEVTNXSSVIHEYYSRECREPVH 330
+ L + K G V SS+IH++Y+RE P+H
Sbjct: 85 VDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIH 136
>UniRef50_A1Z6K7 Cluster: CG8335-PA; n=1; Drosophila
melanogaster|Rep: CG8335-PA - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKEHAD--QVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+G +E+TN F VPHKEH++ ++ ++ YA +V LN +E ++GW+
Sbjct: 46 EGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWF 95
Score = 42.7 bits (96), Expect = 0.006
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLXLRATQRTCRSSXSGT* 186
V + P+V FQI+DAY+RR ++V+G L+G ++ G ++ T S +
Sbjct: 12 VYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKE---GHIEITNCFTVPHKEHSENKRI 68
Query: 187 LRDGCLXAE--QKSQFL*KYCWLVG---XGNEVTNXSSVIHEYYSRECRE--PVH 330
D +E + + F ++G G V+ +S+IH+YY REC E P+H
Sbjct: 69 DLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLH 123
>UniRef50_Q54C49 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 284
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
++VKVHPVV+F I+D Y RRN RVIG L+G
Sbjct: 13 VTVKVHPVVIFNILDHYIRRNVGQDRVIGTLLG 45
Score = 36.7 bits (81), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 113 GVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
GV+E+ N F V H E +Q+ E+ Y + L+ + + E I+GW+
Sbjct: 50 GVLEIRNCFPVVHSE-TEQIAVEMEYQRKMLDLHLKSSPREPIIGWY 95
>UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=16;
Ascomycota|Rep: Translation initiation factor eIF3f -
Schizosaccharomyces pombe (Fission yeast)
Length = 302
Score = 46.0 bits (104), Expect = 7e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 119 VEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+E+ + F VPH E ++QV E+ Y +Y L+ + N E +VGW+
Sbjct: 62 IEIKSCFAVPHNESSEQVEVEMEYHRAMYHLHLKANPREVVVGWY 106
Score = 33.1 bits (72), Expect = 5.1
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
+++ + P VLF I+D R++ ++ RVIG L+G
Sbjct: 21 LNIVIEPAVLFSILDHSTRKSENNQRVIGTLLG 53
>UniRef50_Q5DDP2 Cluster: SJCHGC06192 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06192 protein - Schistosoma
japonicum (Blood fluke)
Length = 273
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 4 SVKVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
+V VHPVVL IVDAYERR S RVIG L+G
Sbjct: 6 AVHVHPVVLASIVDAYERRAEGSERVIGTLLG 37
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
KG++EVT+ + ++E A V +L + + L R+VN S IVGW+
Sbjct: 41 KGIIEVTHCYSALYQESAADVCMDLEFGNSMAALERKVNHSHCIVGWY 88
Score = 35.9 bits (79), Expect = 0.72
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 396 LGVPNGKQGXMFXPXDVXLTCYEPEIVGLQVCQKTV 503
+G+P GK+G +F P +V + CY PE +++ ++
Sbjct: 138 MGIPGGKRGSIFVPVEVEVECYGPERCAVEMMVSSI 173
>UniRef50_Q4PI88 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 301
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
V VHPV LF I+D Y RRN HRVIG L+G
Sbjct: 32 VHVHPVALFSILDHYLRRNDGQHRVIGTLLG 62
Score = 43.6 bits (98), Expect = 0.004
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +2
Query: 119 VEVTNXFCVPHKEHAD--QVXAELNYAMDVYXLNRRVNSSESIVGWWGXAMK*PTXPLL- 289
+E+ N F VPH E A+ QV ++ Y +Y L ++V E IVGW+ + + T L
Sbjct: 69 IEIKNCFAVPHLEDAEEGQVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALI 128
Query: 290 ---YT-SIIPVNAVSLSMXXCDTSXGGGRMGLRGI 382
Y+ P AV L+M DT+ G + GI
Sbjct: 129 QDFYSRETAPHQAVHLTM---DTTIDGSKPSGLGI 160
>UniRef50_A7AT42 Cluster: Mov34/MPN/PAD-1 family protein; n=3;
Piroplasmida|Rep: Mov34/MPN/PAD-1 family protein -
Babesia bovis
Length = 314
Score = 40.7 bits (91), Expect = 0.025
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 10 KVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
K+HPVV+F I+D+Y RR H +IG L+G
Sbjct: 34 KLHPVVVFTILDSYMRREEGQHNIIGTLLG 63
>UniRef50_Q6C4H1 Cluster: Similar to tr|Q9P748 Neurospora crassa
Related to translation initiation factor 3; n=1;
Yarrowia lipolytica|Rep: Similar to tr|Q9P748 Neurospora
crassa Related to translation initiation factor 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 294
Score = 40.3 bits (90), Expect = 0.034
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
D VEV N + VPH E ++ +L Y + L+R+ E IVGW+
Sbjct: 55 DGSEVEVRNAYAVPHSESEQEMTIDLEYNPTMLALHRKAFPKEVIVGWY 103
>UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 314
Score = 38.3 bits (85), Expect = 0.14
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKE-HADQVX-AELNYAMDVYXLNRRVNSSESIVGWW 253
KG+V+V N F VP E D + + Y VY + +RV + E +VGW+
Sbjct: 47 KGIVDVMNSFAVPFDEDEKDNIWYLDHQYLETVYRMTQRVTAKEVLVGWY 96
>UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit,
putative; n=8; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium falciparum (isolate 3D7)
Length = 338
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 113 GVVEVTNXFCVPHKEHADQV---XAELNYAMDVYXLNRRVNSSESIVGWW 253
GVV +TN + +P +E + + NY +++ + R++N+ E IVGW+
Sbjct: 58 GVVHITNSYALPFEEDIKDINIFYIDDNYNENLFNMIRKINTREKIVGWY 107
>UniRef50_A5K6P8 Cluster: Eukaryotic translation initiation factor 3
subunit 5, putative; n=5; Plasmodium|Rep: Eukaryotic
translation initiation factor 3 subunit 5, putative -
Plasmodium vivax
Length = 320
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 13 VHPVVLFQIVDAYERRNADSHRVIGHLIG 99
VHP V+F I+DAY RR+ D VIG L+G
Sbjct: 35 VHPSVIFTILDAYLRRDEDQTHVIGTLMG 63
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKEHADQVXA---ELNYAMDVYXLNRRVNSSESIVGWWGXAMK 268
+G ++VT+ F VP +E D + Y ++Y ++R++++ E IVGW+ K
Sbjct: 48 RGRIDVTSSFAVPFEEEDDASGIWFLDHVYLENMYRMSRKISAKEKIVGWYSTGPK 103
>UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_32, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +2
Query: 113 GVVEVTNXFCVPHKEHA-DQVXAELN--YAMDVYXLNRRVNSSESIVGWW 253
GV+++TN + +P +E DQ L+ Y ++ L+R++N +E IVGW+
Sbjct: 48 GVIDITNSYALPFEEDPKDQNIWYLDHIYNETLFELHRKININEKIVGWY 97
>UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8; n=2; Cryptosporidium|Rep: 26S
proteasome regulatory particle non-ATPase subunit8 -
Cryptosporidium hominis
Length = 313
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXA---ELNYAMDVYXLNRRVNSSESIVGWWGXAMK 268
D+ + VTN + +P +E + + NY +Y + +++N+ E IVGW+ K
Sbjct: 60 DEDGIHVTNSYALPFEEDSRDPTVWYLDHNYHEQMYLMFKKINTKEKIVGWYSTGPK 116
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 4 SVKVHPVVLFQIVDAYER-RNADSHRVIGHLIGHERQRSG 120
++ +HP+VL IVD Y R S RV+G L+G G
Sbjct: 24 NIIIHPIVLLSIVDHYNRIAKGTSKRVVGTLLGELHDEDG 63
>UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=51; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 7 - Homo sapiens (Human)
Length = 324
Score = 35.5 bits (78), Expect = 0.96
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKEHA--DQVX-AELNYAMDVYXLNRRVNSSESIVGWWGXAMK*PTX 280
K V++V+N F VP E D V + +Y ++Y + ++VN+ E IVGW+ T
Sbjct: 45 KKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWY------HTG 98
Query: 281 PLLYTSIIPVN 313
P L+ + I +N
Sbjct: 99 PKLHKNDIAIN 109
>UniRef50_Q9C5Z2 Cluster: Eukaryotic translation initiation factor 3
subunit 3; n=6; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 337
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 116 VVEVTNXFCVPHKEHADQVXAE-LNYAMDVYXLNRRVNSSESIVGWW 253
V+EVTN F P ++ +++ A+ NY +++ R VN + VGW+
Sbjct: 59 VLEVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWY 105
>UniRef50_UPI000058941E Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 356
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 9 EGPSCCFISNCGRIRTSKCRFSQSYRAPYWARATKEWWK*PTXSACH 149
EG C++ NCG I +S + + + W + + EW K P A H
Sbjct: 288 EGVGGCYLDNCGSIASSSLTYDRKLQVALW-KESCEWCKLPADIASH 333
>UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8;
Fungi/Metazoa group|Rep: Clone ZZD1069 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 356
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 116 VVEVTNXFCVPHKEHA---DQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+++V+N F VP +E A D + +Y ++ + ++VN+ E IVGW+
Sbjct: 63 ILDVSNSFAVPFEEDATDPDVWFLDHDYLESMFAMFKKVNAREKIVGWY 111
>UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 7 -
Dictyostelium discoideum AX4
Length = 325
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKE---HADQVXAELNYAMDVYXLNRRVNSSESIVGWWGXAMK 268
+KGVV+V+N + +P +E + + + N+ +++ + +++N+ E++VGW+ K
Sbjct: 42 NKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPK 98
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 4 SVKVHPVVLFQIVDAYERRNADSH-RVIGHLIG 99
S VHP VL +VD Y R D++ RV+G L+G
Sbjct: 7 STIVHPTVLLSVVDHYNRVAKDTNKRVVGALLG 39
>UniRef50_Q18967 Cluster: Putative uncharacterized protein eif-3.F;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein eif-3.F - Caenorhabditis elegans
Length = 294
Score = 34.3 bits (75), Expect = 2.2
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+KG ++VTN F +P E D + + + + ++ + +E VGW+
Sbjct: 46 EKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWF 94
>UniRef50_Q5KER5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 303
Score = 34.3 bits (75), Expect = 2.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 119 VEVTNXFCVPHKEHADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
V++ + F VPH E Q+ + + D+ + + E IVGW+
Sbjct: 68 VDIRSCFAVPHTEQGQQISVDRPFQQDMVNFLAKNGTKEVIVGWY 112
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADSH--RVIGHLIGHERQRSGGSNQLXLRA 147
+ VHP V+ QI+ + R +ADS RVIG L+G+ RS ++ +R+
Sbjct: 27 ITVHPSVIAQILTHHSRHSADSESTRVIGALMGN---RSDNGQEVDIRS 72
>UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;
n=27; Eukaryota|Rep: 26S proteasome regulatory subunit
RPN8 - Saccharomyces cerevisiae (Baker's yeast)
Length = 338
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +2
Query: 107 DKGVVEVTNXFCVPHKE---HADQVXAELNYAMDVYXLNRRVNSSESIVGWW 253
+ + VTN F +P +E ++D + NY ++ + +++N+ E ++GW+
Sbjct: 42 NSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWY 93
>UniRef50_Q5CYT6 Cluster: EIF3-p47 with JAB/PAD domain; n=2;
Cryptosporidium|Rep: EIF3-p47 with JAB/PAD domain -
Cryptosporidium parvum Iowa II
Length = 349
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 1 ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIGH 102
IS +V+P+V+ I+D++ RR + VIG L+G+
Sbjct: 38 ISCRVNPLVILSILDSHLRRQSGHQYVIGTLLGY 71
>UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subunit
8, putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit 8, putative - Leishmania
major
Length = 359
Score = 33.1 bits (72), Expect = 5.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 7 VKVHPVVLFQIVDAYERRNADS---HRVIGHLIGHERQRSGGSNQLXL 141
V+VHP+VL +VD Y R N + RV G L+G + S G L +
Sbjct: 44 VEVHPLVLLSLVDHYARMNTSAVQKKRVAGLLLGRYVRDSTGMQTLDI 91
Score = 32.3 bits (70), Expect = 8.9
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 119 VEVTNXFCVPHKEHADQVXA---ELNYAMDVYXLNRRVNSSESIVGWW 253
+++ N F VP E + NYA +++ +++RV +VGW+
Sbjct: 89 LDINNSFAVPFDEDPQDAGVWFFDTNYAQEMFAMHKRVLPKVKVVGWY 136
>UniRef50_A2DZC5 Cluster: Mov34/MPN/PAD-1 family protein; n=1;
Trichomonas vaginalis G3|Rep: Mov34/MPN/PAD-1 family
protein - Trichomonas vaginalis G3
Length = 256
Score = 32.7 bits (71), Expect = 6.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 10 KVHPVVLFQIVDAYERRNADSHRVIGHLIG 99
++HP+V+F+I D Y RR + + +G L+G
Sbjct: 24 QIHPLVIFKIADMYLRRGPEVNYCVGLLLG 53
>UniRef50_A7Q0N3 Cluster: Chromosome chr7 scaffold_42, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_42, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 582
Score = 32.3 bits (70), Expect = 8.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 196 GCLXAEQKSQFL*KYCWLVGXGNEVTNXSSVIHEYYSRECREPVHXXLRHFXGWRSNG 369
GC E+ S+FL + W+ ++ N I Y+++ RE + HF G++ NG
Sbjct: 205 GCQQFERASRFLTRCEWIA---SDTGNPVERIVFYFAKALREKIDRETGHFKGFKGNG 259
>UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like
metallopeptidase; n=2; Trichomonas vaginalis G3|Rep:
Clan MP, family M67, Poh1-like metallopeptidase -
Trichomonas vaginalis G3
Length = 311
Score = 32.3 bits (70), Expect = 8.9
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 110 KGVVEVTNXFCVPHKEHADQVXA---ELNYAMDVYXLNRRVNSSESIVGWW 253
KG + F VP +E ++ + N+ ++Y L+++V E I+GW+
Sbjct: 48 KGQANIFQCFGVPFEEDSEDPSVWYFDTNFIEEMYSLHKKVTLKEKIIGWY 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,201,401
Number of Sequences: 1657284
Number of extensions: 9280618
Number of successful extensions: 22183
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22176
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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