Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30534.Seq
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 131 6e-30
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 109 2e-23
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 101 7e-21
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 100 2e-20
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 98 9e-20
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 84 1e-15
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 83 4e-15
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 79 5e-14
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 76 4e-13
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 73 2e-12
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 73 4e-12
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 70 3e-11
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 67 1e-10
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 60 2e-08
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 54 1e-06
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 52 8e-06
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 44 0.002
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 43 0.003
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 43 0.003
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 42 0.008
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 38 0.14
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 37 0.24
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 36 0.42
UniRef50_Q0CAU7 Cluster: Predicted protein; n=2; Aspergillus ter... 35 0.73
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 35 0.97
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 3.0
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 33 3.0
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 32 5.2
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_UPI00004998AA Cluster: DNA-directed RNA polymerase I la... 31 9.0
UniRef50_Q5FHS5 Cluster: Transcription regulator family; n=1; La... 31 9.0
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 31 9.0
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 131 bits (317), Expect = 6e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
MAKPKGER+GKSAINE TR YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 233 VDTRLNK 253
VDTRLNK
Sbjct: 61 VDTRLNK 67
Score = 97.9 bits (233), Expect = 9e-20
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + LWSKGVRNVPF NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 65 LNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 109 bits (263), Expect = 2e-23
Identities = 50/68 (73%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERE-GKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE++ G+SAINE TR YT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 101 bits (242), Expect = 7e-21
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINE TR T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 100 bits (239), Expect = 2e-20
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
MAK K E++ KSAINE TR T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 61 IDTRLNKA 68
Score = 71.7 bits (168), Expect = 7e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + LW +G+RN PF NDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 65 LNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 97.9 bits (233), Expect = 9e-20
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +2
Query: 77 EGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
EG TR YT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK+
Sbjct: 50 EGPFCHQRGSTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA 109
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 84.2 bits (199), Expect = 1e-15
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +2
Query: 65 KGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTR 244
KG++ +SA+N+ TR YTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D +
Sbjct: 58 KGKKT-RSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLDPK 116
Query: 245 LNKSFGLRESEMFP 286
LN+ + FP
Sbjct: 117 LNQEVWKYGVKNFP 130
Score = 38.7 bits (86), Expect = 0.060
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 411
L Q +W GV+N P NDDE + KL+T V + + + KGLQT +D
Sbjct: 117 LNQEVWKYGVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 82.6 bits (195), Expect = 4e-15
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +2
Query: 77 EGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
E K E TR YT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LNK
Sbjct: 3 EKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 61
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 148 CWI*KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDD 327
C K PK+ + K K G L + +WSKG+R P NDD
Sbjct: 27 CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDD 86
Query: 328 EDSAHKLFTLVTY--VPVASIKGLQTENVD 411
ED+ + F+LVT +P + GL T+ ++
Sbjct: 87 EDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 79.0 bits (186), Expect = 5e-14
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = +2
Query: 56 AKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 235
AK G+++G SAINE TR YT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 236 DTRLNKSF 259
T LN F
Sbjct: 64 CT-LNSLF 70
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 75.8 bits (178), Expect = 4e-13
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +2
Query: 77 EGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 238
E K E TR YT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 73.3 bits (172), Expect = 2e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 107 TRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFP 286
TR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK+ + +
Sbjct: 26 TRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNVS 85
Query: 287 SVSV*GFHEDVMMMKI 334
V + GF E++M + I
Sbjct: 86 WVPICGF-ENMMKLNI 100
Score = 35.1 bits (77), Expect = 0.73
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 256 LWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGL 393
+W+KG NV + N + + HKL+TL+TYVPV + K L
Sbjct: 76 VWNKGTSNVSWVPICGFE---NMMKLNIHKLYTLITYVPVTTFKNL 118
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 72.5 bits (170), Expect = 4e-12
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +WSKGVRNVP+ N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 34 LNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 176 AIKEIRKFAEKQMGTPDIRVDTRLNKS 256
A IRKFA K+MGTPD+R+DTRLNK+
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKA 37
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 69.7 bits (163), Expect = 3e-11
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 118 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
Score = 52.4 bits (120), Expect = 5e-06
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +2
Query: 158 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
+K RA+K+IRKFA K++GTPD+R+DTRLNK+
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKA 121
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 67.3 bits (157), Expect = 1e-10
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +2
Query: 119 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNK
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNK 56
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +1
Query: 160 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSA 339
K P++ + + KT G L + +WS G+RN+P N++E +
Sbjct: 26 KKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVRVRLCKRKNEEEGAQ 85
Query: 340 HKLFTLVTYVPVASIKGLQTENVDA 414
+ +TLV ++ V S GL TE A
Sbjct: 86 SQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 107 TRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 253
T+V T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNK
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNK 87
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 402
L + +WSKG+RN P N+DEDS +++TLV +V V S KGL E
Sbjct: 85 LNKFIWSKGIRNPPKRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = -1
Query: 249 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYTRV 106
F + R S VP+C ANF ISL ALGA FL TP + LCKL VY+RV
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRV 75
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 51.6 bits (118), Expect = 8e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +2
Query: 44 KITMAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 223
K+ KP E + K TR T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAPI--TREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 224 DIRVDTRLNK 253
+++ D LN+
Sbjct: 86 NVKFDMGLNQ 95
Score = 46.0 bits (104), Expect = 4e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 420
L Q +WS+G+R+V + E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 93 LNQFIWSQGIRSVADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 152 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKS 256
GF++ P +KEIRKFA K+MGTPD+ +D NK+
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKA 83
Score = 36.3 bits (80), Expect = 0.32
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 160 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRN-VPFXXXXXXXXXXNDDEDS 336
+ACP + K K G + + ++G+RN VP +DEDS
Sbjct: 52 EACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKEDEDS 111
Query: 337 AHKLFTLVTYVPVAS 381
+KL+ LVT VPV +
Sbjct: 112 PNKLYRLVTCVPVTT 126
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +1
Query: 241 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 402
SL + +W++G+RN+P +++D K +TL +VPV + GL+TE
Sbjct: 314 SLNEAVWARGIRNLPRRIRVRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 125 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
N+HKR+ G F KR AIKEI+KFA K +IR++ LN
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELN 56
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 241 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 411
SL +W KGV+ VP E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 130 SLNTYIWHKGVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
Score = 41.1 bits (92), Expect = 0.011
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +2
Query: 119 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 250
T++L K L F KRAP AIK I+ F + M T D R+D LN
Sbjct: 89 TIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLN 132
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 41.5 bits (93), Expect = 0.008
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 110 RVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFPS 289
R+YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ R + P+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 101 DGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEM 280
+GT VY VNL +R++ +RA RA++ +R+F + ++ +D LN R E
Sbjct: 4 EGTWVYVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREK 62
Query: 281 FPS 289
P+
Sbjct: 63 PPA 65
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 36.7 bits (81), Expect = 0.24
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 92 INEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLR 268
++++ RVYT+ L K L +RA RAI I++FA M +IR+D ++ LR
Sbjct: 1 MSQESERVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLR 58
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 35.9 bits (79), Expect = 0.42
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 113 VYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKSFGLRESEMFPS 289
++TV + K V KRAPRA+K +R+F + ++ +D ++N+ R E PS
Sbjct: 10 IFTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPS 68
>UniRef50_Q0CAU7 Cluster: Predicted protein; n=2; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 652
Score = 35.1 bits (77), Expect = 0.73
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 8 RVFLS*IRYTKLKITMAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKE 187
R+F + T+++ T P E+ G + E+G R TVN ++ + GVG KK R +K+
Sbjct: 260 RLFTTPSNTTQMQSTQTPP--EKPGAIPVTENGNRTITVNEYETIWGVGSKKE--RLLKQ 315
Query: 188 IRKF 199
F
Sbjct: 316 SETF 319
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 34.7 bits (76), Expect = 0.97
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 98 EDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLN 250
+DG +YT+NL +RL+ RA RA++ +R+F + G D+++D +N
Sbjct: 5 KDGV-IYTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVN 55
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 3.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 325 DEDSAHKLFTLVTYVPVASIKGLQTENV 408
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 33.1 bits (72), Expect = 3.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 110 RVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKSFGLRESEMF 283
RVY++ L ++ RA +A K +RKF + M ++++DT +N+ R +E
Sbjct: 8 RVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGAEKP 67
Query: 284 PS 289
P+
Sbjct: 68 PT 69
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 GKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 253
GK A + ++YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 107 TRVYTVNLHKRLHG 148
TR YT+NLHKRLHG
Sbjct: 17 TREYTINLHKRLHG 30
>UniRef50_UPI00004998AA Cluster: DNA-directed RNA polymerase I largest
subunit; n=4; Entamoeba histolytica HM-1:IMSS|Rep:
DNA-directed RNA polymerase I largest subunit - Entamoeba
histolytica HM-1:IMSS
Length = 1522
Score = 31.5 bits (68), Expect = 9.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 26 IRYTKLKITMAKPKGEREGKSAINEDGTRVYTVNLHKRLHG-VGFKKRAPRAIKEIRKFA 202
++Y K I +P G G+S I E T++ H G V PR IKE+ FA
Sbjct: 1071 LKYNKSLINPGEPVGVLAGQS-IGEPSTQMTLNTFHLAGRGDVNVTLGMPR-IKELVMFA 1128
Query: 203 EKQMGTPDI 229
+K++ TP +
Sbjct: 1129 KKEIATPSM 1137
>UniRef50_Q5FHS5 Cluster: Transcription regulator family; n=1;
Lactobacillus acidophilus|Rep: Transcription regulator
family - Lactobacillus acidophilus
Length = 243
Score = 31.5 bits (68), Expect = 9.0
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 86 SAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMG 217
++I E+G R YTV K+L V F K ++K+I+K E + G
Sbjct: 33 NSIGENGYRFYTVEQVKQLKLVIFLKELGFSLKDIQKILEDENG 76
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 31.5 bits (68), Expect = 9.0
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 DGTRVYTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 238
+G YT + KRL G G +R + E R F E+ T D+RVD
Sbjct: 26 EGLCPYTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVD 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,104,559
Number of Sequences: 1657284
Number of extensions: 7538421
Number of successful extensions: 15556
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15551
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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