Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30534.Seq
(459 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p pro... 101 5e-22
AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,... 101 5e-22
AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,... 101 5e-22
AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,... 101 5e-22
AY058378-1|AAL13607.1| 650|Drosophila melanogaster GH14380p pro... 30 1.3
AE014298-800|AAF46086.2| 650|Drosophila melanogaster CG12239-PA... 30 1.3
BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro... 27 9.2
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P... 27 9.2
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P... 27 9.2
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P... 27 9.2
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P... 27 9.2
>AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p
protein.
Length = 124
Score = 101 bits (242), Expect = 5e-22
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINE TR T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,
isoform C protein.
Length = 124
Score = 101 bits (242), Expect = 5e-22
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINE TR T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,
isoform B protein.
Length = 124
Score = 101 bits (242), Expect = 5e-22
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINE TR T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,
isoform A protein.
Length = 124
Score = 101 bits (242), Expect = 5e-22
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
M K KGE+ KSAINE TR T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 VDTRLNK 253
+DTRLNK
Sbjct: 61 IDTRLNK 67
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 423
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AY058378-1|AAL13607.1| 650|Drosophila melanogaster GH14380p
protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
+A+ + ER + ED RV + +R++G F+ R +E + ++ + + R
Sbjct: 457 VAERRMERVEEEVEREDSRRVERREIQRRVNGEEFRTNERREEREDTRREDRVDTSREER 516
Query: 233 VDTRLNKSFGLRESE 277
DTR + GLR E
Sbjct: 517 EDTRRVERDGLRREE 531
>AE014298-800|AAF46086.2| 650|Drosophila melanogaster CG12239-PA
protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 53 MAKPKGEREGKSAINEDGTRVYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
+A+ + ER + ED RV + +R++G F+ R +E + ++ + + R
Sbjct: 457 VAERRMERVEEEVEREDSRRVERREIQRRVNGEEFRTNERREEREDTRREDRVDTSREER 516
Query: 233 VDTRLNKSFGLRESE 277
DTR + GLR E
Sbjct: 517 EDTRRVERDGLRREE 531
>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p
protein.
Length = 1001
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 340 VRNLHHHYVFVKASHGHGREH 278
V+ L+HH V V +HGH H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640
>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
isoform E protein.
Length = 1001
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 340 VRNLHHHYVFVKASHGHGREH 278
V+ L+HH V V +HGH H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640
>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
isoform C protein.
Length = 1029
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 340 VRNLHHHYVFVKASHGHGREH 278
V+ L+HH V V +HGH H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640
>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
isoform B protein.
Length = 1029
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 340 VRNLHHHYVFVKASHGHGREH 278
V+ L+HH V V +HGH H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640
>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
isoform A protein.
Length = 1029
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 340 VRNLHHHYVFVKASHGHGREH 278
V+ L+HH V V +HGH H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,932,114
Number of Sequences: 53049
Number of extensions: 372099
Number of successful extensions: 969
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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