Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30533.Seq
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.44 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.44 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 549 FFFFFAVHNIYYVLDFTFYELINNAL 472
           FF+FF   NI    D  FY  I+NAL
Sbjct: 246 FFYFFTTGNIIATYDKQFY--IHNAL 269


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 549 FFFFFAVHNIYYVLDFTFYELINNAL 472
           FF+FF   NI    D  FY  I+NAL
Sbjct: 242 FFYFFTTGNIIATYDKQFY--IHNAL 265


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 PFRWCISRKGHRPRES 172
           PF+W   +K  R RES
Sbjct: 323 PFKWLFKKKKRRNRES 338


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
 Frame = -3

Query: 550 FFFFFCCTQYLL---------CTGFYIL*TYKQRASRQQVTYHNVHL*SWSLLFLFVESE 398
           FFF FCC  + +          T   +L TY+Q   RQ+ +    H   W+   +    E
Sbjct: 11  FFFSFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKS----HPPQWTWQCINQRCE 66

Query: 397 ERHV 386
            RH+
Sbjct: 67  RRHI 70


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 332 GHAVGDIPGVR 364
           G AVGD+PG+R
Sbjct: 62  GTAVGDVPGLR 72


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 446 CTPMILVAPFSLCRERGET 390
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,425
Number of Sequences: 336
Number of extensions: 3188
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)