Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30532.Seq
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 70 3e-12
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 70 3e-12
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 70 3e-12
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 45 8e-05
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 45 8e-05
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 45 8e-05
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 45 8e-05
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 45 8e-05
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 36 0.047
AE014297-2937|AAS65190.1| 181|Drosophila melanogaster CG17284-P... 33 0.33
AE014297-2936|AAF55855.2| 196|Drosophila melanogaster CG17284-P... 33 0.33
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3
Query: 219 KEAFFCHQEEEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 398
K A +++E + RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 29 KAAVIALRKKENLV-RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87
Query: 399 INQVSPK 419
IN+V+PK
Sbjct: 88 INKVAPK 94
Score = 67.3 bits (157), Expect = 2e-11
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 511 AEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPIT 615
AEPYI WGYPNLKSVREL+YKRGF K + QR+PIT
Sbjct: 126 AEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPIT 160
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2
Query: 416 EVRKVLQLFRLRQINNGVFVRLNKATVNMLR 508
+VRKVLQLFRLRQINNGVF++LNKAT+NMLR
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLR 124
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3
Query: 219 KEAFFCHQEEEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 398
K A +++E + RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 42 KAAVIALRKKENLV-RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 399 INQVSPK 419
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 67.3 bits (157), Expect = 2e-11
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 511 AEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPIT 615
AEPYI WGYPNLKSVREL+YKRGF K + QR+PIT
Sbjct: 139 AEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPIT 173
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2
Query: 416 EVRKVLQLFRLRQINNGVFVRLNKATVNMLR 508
+VRKVLQLFRLRQINNGVF++LNKAT+NMLR
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLR 137
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKRES 258
PV K +KKLPAVPES LK + LK+ + +K+E+
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKEN 53
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3
Query: 219 KEAFFCHQEEEGIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 398
K A +++E + RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 42 KAAVIALRKKENLV-RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 399 INQVSPK 419
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 67.3 bits (157), Expect = 2e-11
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 511 AEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPIT 615
AEPYI WGYPNLKSVREL+YKRGF K + QR+PIT
Sbjct: 139 AEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPIT 173
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2
Query: 416 EVRKVLQLFRLRQINNGVFVRLNKATVNMLR 508
+VRKVLQLFRLRQINNGVF++LNKAT+NMLR
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLR 137
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 109 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKRES 258
PV K +KKLPAVPES LK + LK+ + +K+E+
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKEN 53
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 45.2 bits (102), Expect = 8e-05
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 514 EPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 612
EP++ +G P+L S+RELV+K+GFA++ G++ I
Sbjct: 145 EPFVVYGNPSLSSIRELVFKKGFARIDGKKTAI 177
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 45.2 bits (102), Expect = 8e-05
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 514 EPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 612
EP++ +G P+L S+RELV+K+GFA++ G++ I
Sbjct: 145 EPFVVYGNPSLSSIRELVFKKGFARIDGKKTAI 177
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 45.2 bits (102), Expect = 8e-05
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 514 EPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 612
EP++ +G P+L S+RELV+K+GFA++ G++ I
Sbjct: 145 EPFVVYGNPSLSSIRELVFKKGFARIDGKKTAI 177
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 45.2 bits (102), Expect = 8e-05
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 514 EPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 612
EP++ +G P+L S+RELV+K+GFA++ G++ I
Sbjct: 145 EPFVVYGNPSLSSIRELVFKKGFARIDGKKTAI 177
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 45.2 bits (102), Expect = 8e-05
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 514 EPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPI 612
EP++ +G P+L S+RELV+K+GFA++ G++ I
Sbjct: 145 EPFVVYGNPSLSSIRELVFKKGFARIDGKKTAI 177
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 35.9 bits (79), Expect = 0.047
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 553 HSLSWGI-PKQCKARRT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 413
H L GI P H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 44 HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 410 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 273
+LVDT D+DDK QFG G+V + + + D F LD + L +L
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139
>AE014297-2937|AAS65190.1| 181|Drosophila melanogaster CG17284-PB,
isoform B protein.
Length = 181
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 217 LKRRSSAIKKKRESSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESV 396
+++ AI R+S G NST+ N RN +KSD HA +A +F + N L S
Sbjct: 25 VQKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGT 81
Query: 397 VSTK 408
V+T+
Sbjct: 82 VNTQ 85
>AE014297-2936|AAF55855.2| 196|Drosophila melanogaster CG17284-PA,
isoform A protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 217 LKRRSSAIKKKRESSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESV 396
+++ AI R+S G NST+ N RN +KSD HA +A +F + N L S
Sbjct: 40 VQKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGT 96
Query: 397 VSTK 408
V+T+
Sbjct: 97 VNTQ 100
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,875,318
Number of Sequences: 53049
Number of extensions: 523667
Number of successful extensions: 1229
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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