Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30531.Seq
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 125 6e-28
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 118 7e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 114 1e-24
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 111 9e-24
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 107 1e-22
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 104 1e-21
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 80 2e-14
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 77 2e-13
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 75 9e-13
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 9e-13
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 72 8e-12
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 71 2e-11
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 68 1e-10
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 68 1e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 7e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 60 4e-08
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 50 3e-05
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.29
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.90
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 35 1.2
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.6
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 34 2.1
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.1
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 3.6
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 3.6
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 4.8
UniRef50_Q8BT42 Cluster: 12 days embryo embryonic body between d... 32 8.3
UniRef50_Q6AKK5 Cluster: Sensor protein; n=1; Desulfotalea psych... 32 8.3
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 8.3
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 8.3
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 125 bits (301), Expect = 6e-28
Identities = 56/68 (82%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH G
Sbjct: 63 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTG 122
Query: 431 GKILGFFF 454
GKILGFFF
Sbjct: 123 GKILGFFF 130
Score = 124 bits (300), Expect = 9e-28
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 118 bits (284), Expect = 7e-26
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 249 IV 254
IV
Sbjct: 184 IV 185
Score = 113 bits (272), Expect = 2e-24
Identities = 51/68 (75%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH G
Sbjct: 186 VNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTG 245
Query: 431 GKILGFFF 454
GKILGFFF
Sbjct: 246 GKILGFFF 253
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 114 bits (274), Expect = 1e-24
Identities = 51/68 (75%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++G
Sbjct: 63 VELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVG 122
Query: 431 GKILGFFF 454
GK+LGFF+
Sbjct: 123 GKVLGFFY 130
Score = 107 bits (257), Expect = 1e-22
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 111 bits (267), Expect = 9e-24
Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH G
Sbjct: 161 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTG 220
Query: 431 GKILGFFFXVY 463
G+ILGFF +
Sbjct: 221 GEILGFFLSFF 231
Score = 101 bits (241), Expect = 1e-20
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 243 GKIV 254
GK+V
Sbjct: 157 GKMV 160
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 107 bits (258), Expect = 1e-22
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 436
LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGK
Sbjct: 64 LTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGK 123
Query: 437 ILGFFF 454
ILGFFF
Sbjct: 124 ILGFFF 129
Score = 107 bits (256), Expect = 2e-22
Identities = 50/62 (80%), Positives = 58/62 (93%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 249 IV 254
+V
Sbjct: 60 MV 61
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 104 bits (250), Expect = 1e-21
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 90 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIV
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIV 228
Score = 95.9 bits (228), Expect = 5e-19
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+NLTGRLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G
Sbjct: 229 VNLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTG 288
Query: 431 GK 436
+
Sbjct: 289 SR 290
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 80.2 bits (189), Expect = 2e-14
Identities = 36/74 (48%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +2
Query: 236 QSWQDCLNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEA 412
+S + ++L GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 55 RSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKEC 114
Query: 413 RRKHLGGKILGFFF 454
+++GGKILG+F+
Sbjct: 115 LTENVGGKILGYFY 128
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSI 60
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 77.0 bits (181), Expect = 2e-13
Identities = 33/68 (48%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
++L GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++G
Sbjct: 62 VDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVG 121
Query: 431 GKILGFFF 454
G++LGFF+
Sbjct: 122 GQVLGFFY 129
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +3
Query: 84 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 251
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 74.9 bits (176), Expect = 9e-13
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +G
Sbjct: 63 VTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIG 122
Query: 431 GKILGFFF 454
G++L + +
Sbjct: 123 GQLLAYVY 130
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 245
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 9e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 200
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 37.9 bits (84), Expect(2) = 9e-13
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 201 GYIGEFEIVDDHRAGKIV 254
GYI EFE +DDHRAGKIV
Sbjct: 107 GYINEFEFIDDHRAGKIV 124
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 71.7 bits (168), Expect = 8e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 249 IV 254
I+
Sbjct: 61 II 62
Score = 59.3 bits (137), Expect = 5e-08
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRK 421
+ L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H + R+
Sbjct: 63 VQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIRE 122
Query: 422 HLGGKILGFFF 454
+GG LG+ +
Sbjct: 123 KIGGVTLGYVY 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 70.5 bits (165), Expect = 2e-11
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +G
Sbjct: 63 VQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIG 122
Query: 431 GKILGFFF 454
G+++ + +
Sbjct: 123 GRLIAYVY 130
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 245
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 67.7 bits (158), Expect = 1e-10
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +G
Sbjct: 80 VELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIG 139
Query: 431 GKILGFFF 454
G+++ + +
Sbjct: 140 GQVIAYVY 147
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 243 GK 248
GK
Sbjct: 76 GK 77
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L+ +N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +G
Sbjct: 62 VELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIG 121
Query: 431 GKILGFFF 454
GK+L + +
Sbjct: 122 GKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 62.1 bits (144), Expect = 7e-09
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++ LG
Sbjct: 62 VELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLG 121
Query: 431 GKILGFFF 454
G +L + +
Sbjct: 122 GVLLAYVY 129
Score = 55.2 bits (127), Expect = 8e-07
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 78 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 254
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFI 61
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
++L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H EA + +G
Sbjct: 63 VHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIG 122
Query: 431 GKILGFFF 454
G ++G+ +
Sbjct: 123 GFLIGYVY 130
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 248
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 430
+ L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +G
Sbjct: 62 IELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIG 121
Query: 431 GKILGFFF 454
G ++ + +
Sbjct: 122 GVLIAYVY 129
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/64 (29%), Positives = 38/64 (59%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV*I 260
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+ I
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKIIEI 62
Query: 261 SQAD 272
++
Sbjct: 63 ELSE 66
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.29
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 454
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.90
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 224
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 207 IGEFEIVDDHRAGKIV 254
IG+FE++DDHRAGKIV
Sbjct: 9 IGKFEVIDDHRAGKIV 24
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 218
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 454
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 33.9 bits (74), Expect = 2.1
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 254
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 255 *ISQAD*TSVVSFHLVLMFPSTILKDGLIC 344
+D + L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.1
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 3.6
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 263 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 442
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182
Query: 443 GFF 451
G+F
Sbjct: 183 GYF 185
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 72 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 242
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 454
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 454
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q8BT42 Cluster: 12 days embryo embryonic body between
diaphragm region and neck cDNA, RIKEN full-length
enriched library, clone:9430031J01 product:hypothetical
protein, full insert sequence; n=4; Amniota|Rep: 12 days
embryo embryonic body between diaphragm region and neck
cDNA, RIKEN full-length enriched library,
clone:9430031J01 product:hypothetical protein, full
insert sequence - Mus musculus (Mouse)
Length = 78
Score = 31.9 bits (69), Expect = 8.3
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 204 YIGEFEIVDDHRAGKIV*ISQAD*TSVVSFHLVLMFPSTILKDGLI-CS 347
++GE V + K+ + QA+ +V+F ++++F +T+L GLI CS
Sbjct: 6 FVGEIRSVGERLLLKLQQLPQAEPVELVAFSIIVLFTATVLVLGLIACS 54
>UniRef50_Q6AKK5 Cluster: Sensor protein; n=1; Desulfotalea
psychrophila|Rep: Sensor protein - Desulfotalea
psychrophila
Length = 963
Score = 31.9 bits (69), Expect = 8.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 314 INDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG---GKILGFFFXVYL 466
+N IER+ ++ GY +L G +++ + +LG G++LG FF +L
Sbjct: 449 LNSIERFKDIFEQAPIGYQLLDDRGALLEVNQTWLDYLGYKKGEVLGKFFIGFL 502
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 8.3
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMDHEEARRKHLGGKIL 442
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 8.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 353 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 448
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,443,165
Number of Sequences: 1657284
Number of extensions: 7649745
Number of successful extensions: 16295
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16277
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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