Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30528.Seq
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    26   0.35 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.60 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.60 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    25   0.80 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   1.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   2.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.3  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   7.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   7.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.8  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.8  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC+LDKG CT
Sbjct: 41  YVNCLLDKGRCT 52


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 69  HRLGNVRPYARRGSMS*GVPLQTPGSALS 155
           H      PY   G    G+PLQ PG  L+
Sbjct: 171 HHYARYHPYPNFGVPPAGIPLQNPGLNLN 199


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NCI+D+G CT
Sbjct: 41  YFNCIMDRGACT 52


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 339 YNNCILDKGLCTHQ 298
           Y +C+LDKG CT +
Sbjct: 41  YLDCVLDKGKCTKE 54


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC+L+KG CT
Sbjct: 46  YVNCLLEKGKCT 57


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y +CIL+KG CT
Sbjct: 42  YLDCILEKGKCT 53


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC+LD+G C+
Sbjct: 44  YVNCLLDRGKCS 55


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC+LD+G C+
Sbjct: 44  YVNCLLDRGKCS 55


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 89  PIRKKRKYELGRPAANTRLGPQRIH 163
           P+R   ++    PA N   GP   H
Sbjct: 36  PLRTSYQHHFNSPAGNAHTGPTGTH 60


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC+L+KG C+
Sbjct: 56  YINCLLEKGPCS 67


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y +CIL KG CT
Sbjct: 43  YIDCILGKGKCT 54


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 342 YYNNCILDKGLCTHQ 298
           YY  C+L KG C  Q
Sbjct: 42  YYAACLLSKGPCPPQ 56


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 348 CIYYNNCILDKGLCTHQFIVRCII 277
           CIYY  C L   LC + F    II
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFII 307


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y +C+L KG CT
Sbjct: 43  YLDCVLGKGKCT 54


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 588 HRRDHTDLGDSPRKPANALCGIALLEH 508
           H +  TDL    R  A  +  +ALLEH
Sbjct: 133 HYQSTTDLHKKIRYSAFGMIFVALLEH 159


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 339 YNNCILDKGLCT 304
           Y NC++++G C+
Sbjct: 46  YFNCLMERGTCS 57


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 339 YNNCILDKGLCTHQ 298
           Y  C++D+G CT +
Sbjct: 45  YIKCLMDEGPCTSE 58


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = -2

Query: 108 FLFLRM--GARFPAGGPSLMPVIPTNTHLSWVKKENSD 1
           FLF  +  G R P     + P+  +    SW   +NSD
Sbjct: 16  FLFFDLCHGVRAPGAKKKVGPIDQSAAAASWHDFDNSD 53


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = -2

Query: 108 FLFLRM--GARFPAGGPSLMPVIPTNTHLSWVKKENSD 1
           FLF  +  G R P     + P+  +    SW   +NSD
Sbjct: 16  FLFFDLCHGVRAPGAKKKVGPIDQSAAAASWHDFDNSD 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,509
Number of Sequences: 336
Number of extensions: 3375
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)