BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30526.Seq (499 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 99 1e-20 CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 99 1e-20 BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 99 1e-20 BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 99 1e-20 AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 99 1e-20 AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 85 1e-16 AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 42 0.001 U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 40 0.004 CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 40 0.004 BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 40 0.004 BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 40 0.004 AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 40 0.004 AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 40 0.004 D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 39 0.011 BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 39 0.011 BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 39 0.011 BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 39 0.011 >U94855-1|AAD03467.1| 357|Homo sapiens translation initiation factor 3 47 kDa subunit protein. Length = 357 Score = 98.7 bits (235), Expect = 1e-20 Identities = 55/160 (34%), Positives = 79/160 (49%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L IVD+YERRN + RVIG L+G + S + Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 +K TG+++T HS +IHEYYSR P+H+T+DTSL GRM Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQV 486 ++AY +GVP G TP+ V Y+ E +G+ + Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDL 251 Score = 70.5 bits (165), Expect = 3e-12 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT DK VEVTNCF VPH E D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 119 TLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 173 >CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. Length = 357 Score = 98.7 bits (235), Expect = 1e-20 Identities = 55/160 (34%), Positives = 79/160 (49%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L IVD+YERRN + RVIG L+G + S + Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 +K TG+++T HS +IHEYYSR P+H+T+DTSL GRM Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQV 486 ++AY +GVP G TP+ V Y+ E +G+ + Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDL 251 Score = 70.5 bits (165), Expect = 3e-12 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT DK VEVTNCF VPH E D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 119 TLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 173 >BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa protein. Length = 357 Score = 98.7 bits (235), Expect = 1e-20 Identities = 55/160 (34%), Positives = 79/160 (49%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L IVD+YERRN + RVIG L+G + S + Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 +K TG+++T HS +IHEYYSR P+H+T+DTSL GRM Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQV 486 ++AY +GVP G TP+ V Y+ E +G+ + Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDL 251 Score = 70.5 bits (165), Expect = 3e-12 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT DK VEVTNCF VPH E D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 119 TLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 173 >BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa protein. Length = 357 Score = 98.7 bits (235), Expect = 1e-20 Identities = 55/160 (34%), Positives = 79/160 (49%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L IVD+YERRN + RVIG L+G + S + Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 +K TG+++T HS +IHEYYSR P+H+T+DTSL GRM Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQV 486 ++AY +GVP G TP+ V Y+ E +G+ + Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDL 251 Score = 70.5 bits (165), Expect = 3e-12 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT DK VEVTNCF VPH E D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 119 TLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 173 >AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ). Length = 350 Score = 98.7 bits (235), Expect = 1e-20 Identities = 55/160 (34%), Positives = 79/160 (49%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L IVD+YERRN + RVIG L+G + S + Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 +K TG+++T HS +IHEYYSR P+H+T+DTSL GRM Sbjct: 145 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 204 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQV 486 ++AY +GVP G TP+ V Y+ E +G+ + Sbjct: 205 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDL 244 Score = 70.5 bits (165), Expect = 3e-12 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT DK VEVTNCF VPH E D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 112 TLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 166 >AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. Length = 348 Score = 85.0 bits (201), Expect = 1e-16 Identities = 52/156 (33%), Positives = 78/156 (50%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186 V++HPV+L VD+YERRN + RVIG L+G + S + + Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNESDEVVVDMEF 141 Query: 187 LRDGCLRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLAGGRM 366 ++ ++ S W G+++T HS +IHEYYSR P+H+T+DTSL G M Sbjct: 142 AKNMYELHKKVSPNELILGWYAA-GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHM 200 Query: 367 GLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIV 474 ++AY +GVP G TP+ V Y+ E + Sbjct: 201 SIKAYVSTLMGVPGRTVG-VFTPLTVKYAYYDTECI 235 Score = 59.3 bits (137), Expect = 7e-09 Identities = 26/55 (47%), Positives = 42/55 (76%) Frame = +2 Query: 89 TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253 TLLGT +K VEVTNCF V + E +D+V ++ +A ++YEL+++V+ +E I+GW+ Sbjct: 109 TLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDMEFAKNMYELHKKVSPNELILGWY 162 >AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation factor eIF3 p40 subunit protein. Length = 352 Score = 41.9 bits (94), Expect = 0.001 Identities = 25/77 (32%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG K +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >U54559-1|AAD03465.1| 352|Homo sapiens translation initiation factor eIF3 p40 subunit protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa variant protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa variant protein. Length = 352 Score = 40.3 bits (90), Expect = 0.004 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +2 Query: 23 LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202 L K+ H E Q + LLG + +E+TNCF P D E+ Y M++ Sbjct: 44 LVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEM 103 Query: 203 YELNRRVNSSESIVGWW 253 R VN VGW+ Sbjct: 104 MRSLRHVNIDHLHVGWY 120 >D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / Mov34 protein protein. Length = 324 Score = 38.7 bits (86), Expect = 0.011 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Frame = +2 Query: 92 LLGTSDKGVVEVTNCFCVPHKEHA--DQVE-AELNYAMDVYELNRRVNSSESIVGWW 253 LLG+ K V++V+N F VP E D V + +Y ++Y + ++VN+ E IVGW+ Sbjct: 39 LLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWY 95 Score = 29.1 bits (62), Expect = 9.0 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGHLIG 99 V VHP+VL +VD + R + + RV+G L+G Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLG 41 >BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. Length = 349 Score = 38.7 bits (86), Expect = 0.011 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 38 LWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNR 217 ++ H E Q + LLG + +E+TNCF P D E+ Y M++ R Sbjct: 46 VFKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLR 105 Query: 218 RVNSSESIVGWW 253 VN VGW+ Sbjct: 106 HVNIDHLHVGWY 117 >BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) protein. Length = 324 Score = 38.7 bits (86), Expect = 0.011 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Frame = +2 Query: 92 LLGTSDKGVVEVTNCFCVPHKEHA--DQVE-AELNYAMDVYELNRRVNSSESIVGWW 253 LLG+ K V++V+N F VP E D V + +Y ++Y + ++VN+ E IVGW+ Sbjct: 39 LLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWY 95 Score = 29.1 bits (62), Expect = 9.0 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGHLIG 99 V VHP+VL +VD + R + + RV+G L+G Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLG 41 >BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. Length = 326 Score = 38.7 bits (86), Expect = 0.011 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Frame = +2 Query: 92 LLGTSDKGVVEVTNCFCVPHKEHA--DQVE-AELNYAMDVYELNRRVNSSESIVGWW 253 LLG+ K V++V+N F VP E D V + +Y ++Y + ++VN+ E IVGW+ Sbjct: 39 LLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWY 95 Score = 29.1 bits (62), Expect = 9.0 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +1 Query: 7 VKVHPVVLFQIVDAYER--RNADSHRVIGHLIG 99 V VHP+VL +VD + R + + RV+G L+G Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLG 41 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 77,370,374 Number of Sequences: 237096 Number of extensions: 1586511 Number of successful extensions: 2514 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2418 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2508 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4536472160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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