Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30526.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...   157   1e-38
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...   157   1e-38
AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA ...    67   1e-11
AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p pro...    38   0.008
AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,...    38   0.008
AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,...    38   0.008
AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...    37   0.013
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...    37   0.013
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.       35   0.070
BT011129-1|AAR82796.1|  418|Drosophila melanogaster HL04005p pro...    28   8.1  
AY118964-1|AAM50824.1|  628|Drosophila melanogaster LD43740p pro...    28   8.1  
AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6 pro...    28   8.1  
AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-P...    28   8.1  
AE014297-2255|AAF55354.2|  628|Drosophila melanogaster CG31217-P...    28   8.1  

>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score =  157 bits (380), Expect = 1e-38
 Identities = 85/166 (51%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
 Frame = +1

Query: 1   ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIGH-ERQRSGGSNQLLLRATQRTCRSSRS 177
           ++V+VHPVVLFQ+VDA+ERRNADSHRVIG L+G  ++     +N   +   +   +    
Sbjct: 6   LTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65

Query: 178 GT*LRDGC-LRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLA 354
            +   D   L  +  S       W   TGN+VTNHSSVIHEYY+R C  PVH+T+DTSL 
Sbjct: 66  LSYALDMYDLNRKVNSNESVVGWW--ATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQ 123

Query: 355 GGRMGLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQVCQ 492
           GGRMGLRAY    LGVP GK GC  TP+ V LT YEPE  GL++ Q
Sbjct: 124 GGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQ 169



 Score =  109 bits (261), Expect = 3e-24
 Identities = 45/55 (81%), Positives = 53/55 (96%)
 Frame = +2

Query: 89  TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253
           TLLG+ DKGVVEVTNCFCVPHKEH DQVEAEL+YA+D+Y+LNR+VNS+ES+VGWW
Sbjct: 35  TLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWW 89


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score =  157 bits (380), Expect = 1e-38
 Identities = 85/166 (51%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
 Frame = +1

Query: 1   ISVKVHPVVLFQIVDAYERRNADSHRVIGHLIGH-ERQRSGGSNQLLLRATQRTCRSSRS 177
           ++V+VHPVVLFQ+VDA+ERRNADSHRVIG L+G  ++     +N   +   +   +    
Sbjct: 6   LTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65

Query: 178 GT*LRDGC-LRAEQKSQFL*KYCWLVGTGNEVTNHSSVIHEYYSRXCREPVHVTLDTSLA 354
            +   D   L  +  S       W   TGN+VTNHSSVIHEYY+R C  PVH+T+DTSL 
Sbjct: 66  LSYALDMYDLNRKVNSNESVVGWW--ATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQ 123

Query: 355 GGRMGLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQVCQ 492
           GGRMGLRAY    LGVP GK GC  TP+ V LT YEPE  GL++ Q
Sbjct: 124 GGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQ 169



 Score =  109 bits (261), Expect = 3e-24
 Identities = 45/55 (81%), Positives = 53/55 (96%)
 Frame = +2

Query: 89  TLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWW 253
           TLLG+ DKGVVEVTNCFCVPHKEH DQVEAEL+YA+D+Y+LNR+VNS+ES+VGWW
Sbjct: 35  TLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWW 89


>AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA
           protein.
          Length = 286

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYERRNADSHRVIGHLIGHERQRSGGSNQLLLRATQRTCRSSRSGT* 186
           V + P+V FQI+DAY+RR    ++V+G L+G  ++   G  ++    T      S +   
Sbjct: 12  VYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKE---GHIEITNCFTVPHKEHSENKRI 68

Query: 187 LRDGCLRAE--QKSQFL*KYCWLVG---TGNEVTNHSSVIHEYYSRXCRE--PVHVTLDT 345
             D    +E  + + F      ++G   TG  V+  +S+IH+YY R C E  P+H+ +D 
Sbjct: 69  DLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDA 128

Query: 346 SLAGGRMGLRAYXXXPLGVPNGKXGCXXTPVDVTLTCYEPEIVGLQ 483
           +L   R+  R Y    +GVP G  G   + V + ++    ++V L+
Sbjct: 129 ALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALR 174



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 25/61 (40%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +2

Query: 77  ELSATLLGTSDKGVVEVTNCFCVPHKEHAD--QVEAELNYAMDVYELNRRVNSSESIVGW 250
           ++  TLLG + +G +E+TNCF VPHKEH++  +++ ++ YA +V ELN     +E ++GW
Sbjct: 35  QVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGW 94

Query: 251 W 253
           +
Sbjct: 95  F 95


>AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p
           protein.
          Length = 337

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 24/77 (31%), Positives = 33/77 (42%)
 Frame = +2

Query: 23  LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202
           L   K+  H + E   +      LLG      +E+TNCF  P  +  D+   E  Y + V
Sbjct: 26  LAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCF--PFPKSGDETMDEEMYQLTV 83

Query: 203 YELNRRVNSSESIVGWW 253
               RRVN     VGW+
Sbjct: 84  MRRLRRVNVDHLHVGWY 100


>AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,
           isoform B protein.
          Length = 338

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 24/77 (31%), Positives = 33/77 (42%)
 Frame = +2

Query: 23  LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202
           L   K+  H + E   +      LLG      +E+TNCF  P  +  D+   E  Y + V
Sbjct: 27  LAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCF--PFPKSGDETMDEEMYQLTV 84

Query: 203 YELNRRVNSSESIVGWW 253
               RRVN     VGW+
Sbjct: 85  MRRLRRVNVDHLHVGWY 101


>AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,
           isoform A protein.
          Length = 338

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 24/77 (31%), Positives = 33/77 (42%)
 Frame = +2

Query: 23  LFYFKLWTHTNVEMQILTELSATLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDV 202
           L   K+  H + E   +      LLG      +E+TNCF  P  +  D+   E  Y + V
Sbjct: 27  LAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCF--PFPKSGDETMDEEMYQLTV 84

Query: 203 YELNRRVNSSESIVGWW 253
               RRVN     VGW+
Sbjct: 85  MRRLRRVNVDHLHVGWY 101


>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = +2

Query: 92  LLGT-SDKGVVEVTNCFCVPHKEHADQVEA---ELNYAMDVYELNRRVNSSESIVGWW 253
           LLG    KGV++V+N F VP  E          + +Y  ++Y + ++VN+ E +VGW+
Sbjct: 41  LLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWY 98



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYER--RNADSHRVIGHLIGHERQR 114
           V VHP+VL  +VD + R  +  +  RV+G L+G  R +
Sbjct: 11  VIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSK 48


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = +2

Query: 92  LLGT-SDKGVVEVTNCFCVPHKEHADQVEA---ELNYAMDVYELNRRVNSSESIVGWW 253
           LLG    KGV++V+N F VP  E          + +Y  ++Y + ++VN+ E +VGW+
Sbjct: 41  LLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWY 98



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYER--RNADSHRVIGHLIGHERQR 114
           V VHP+VL  +VD + R  +  +  RV+G L+G  R +
Sbjct: 11  VIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSK 48


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
 Frame = +2

Query: 92  LLGT-SDKGVVEVTNCFCVPHK-EHADQVEAELN--YAMDVYELNRRVNSSESIVGWW 253
           LLG    KGV++V+N F VP   +  D+    L+  Y  ++Y + ++VN+ E +VGW+
Sbjct: 41  LLGCWRSKGVLDVSNTFAVPFDVDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWY 98



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 7   VKVHPVVLFQIVDAYER--RNADSHRVIGHLIGHERQR 114
           V VHP+VL  +VD + R  +  +  RV+G L+G  R +
Sbjct: 11  VIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSK 48


>BT011129-1|AAR82796.1|  418|Drosophila melanogaster HL04005p
           protein.
          Length = 418

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 401 TPNGXXXYARKPIRPPASEVSRVTWTG 321
           T NG     RKP  PP +EV  V  TG
Sbjct: 93  THNGQQVECRKPFHPPGTEVKFVCSTG 119


>AY118964-1|AAM50824.1|  628|Drosophila melanogaster LD43740p
           protein.
          Length = 628

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 401 TPNGXXXYARKPIRPPASEVSRVTWTG 321
           T NG     RKP  PP +EV  V  TG
Sbjct: 303 THNGQQVECRKPFHPPGTEVKFVCSTG 329


>AY057373-1|AAL25821.1|  481|Drosophila melanogaster innexin6
           protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 199 CLRAEQKSQFL*KYCWLVGT 258
           CL +E+++ ++  YCW +GT
Sbjct: 54  CLSSERQADYVQSYCWTMGT 73


>AE014298-3002|AAF50922.1|  481|Drosophila melanogaster CG17063-PA
           protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 199 CLRAEQKSQFL*KYCWLVGT 258
           CL +E+++ ++  YCW +GT
Sbjct: 54  CLSSERQADYVQSYCWTMGT 73


>AE014297-2255|AAF55354.2|  628|Drosophila melanogaster CG31217-PA
           protein.
          Length = 628

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 401 TPNGXXXYARKPIRPPASEVSRVTWTG 321
           T NG     RKP  PP +EV  V  TG
Sbjct: 303 THNGQQVECRKPFHPPGTEVKFVCSTG 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,498,295
Number of Sequences: 53049
Number of extensions: 487488
Number of successful extensions: 915
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)