Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30521.Seq
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 212 4e-55
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 212 4e-55
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 211 9e-55
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 209 4e-54
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 181 1e-45
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 41 0.002
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 212 bits (518), Expect = 4e-55
Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 211 bits (515), Expect = 9e-55
Identities = 103/130 (79%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLT+MMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 209 bits (510), Expect = 4e-54
Identities = 103/130 (79%), Positives = 111/130 (85%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 121 TGGKILGFFF 130
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 181 bits (440), Expect = 1e-45
Identities = 93/130 (71%), Positives = 102/130 (78%), Gaps = 1/130 (0%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMK DHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 60 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 119
Query: 58 LGGKILGFFF 29
GGKILGFFF
Sbjct: 120 TGGKILGFFF 129
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2
Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKF 305
MV MNVL+ ALKSI+N + RGK QVL R C + F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,180,301
Number of Sequences: 237096
Number of extensions: 983869
Number of successful extensions: 1573
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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