BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30521.Seq (449 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55 BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55 BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55 BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 212 4e-55 AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 212 4e-55 AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 212 4e-55 X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 211 9e-55 BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 209 4e-54 X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 181 1e-45 BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 41 0.002 >BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. Length = 130 Score = 212 bits (518), Expect = 4e-55 Identities = 104/130 (80%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 211 bits (515), Expect = 9e-55 Identities = 103/130 (79%), Positives = 112/130 (86%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLT+MMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a protein. Length = 130 Score = 209 bits (510), Expect = 4e-54 Identities = 103/130 (79%), Positives = 111/130 (85%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKV V+FLTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 61 IVVNLTGRLNKCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 121 TGGKILGFFF 130 >X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous to yeast S24 protein. Length = 129 Score = 181 bits (440), Expect = 1e-45 Identities = 93/130 (71%), Positives = 102/130 (78%), Gaps = 1/130 (0%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKFLTVMMKXRLXRRV*NRCDHRAGK 236 MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMK DHRAGK Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59 Query: 235 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 59 IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH Sbjct: 60 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 119 Query: 58 LGGKILGFFF 29 GGKILGFFF Sbjct: 120 TGGKILGFFF 129 >BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MGC:88417) protein. Length = 37 Score = 41.1 bits (92), Expect = 0.002 Identities = 21/37 (56%), Positives = 25/37 (67%) Frame = -2 Query: 415 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVXVKF 305 MV MNVL+ ALKSI+N + RGK QVL R C + F Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 56,180,301 Number of Sequences: 237096 Number of extensions: 983869 Number of successful extensions: 1573 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1546 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 3701294870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -