Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30520.Seq
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 134 7e-31
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 128 6e-29
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 114 7e-25
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 113 2e-24
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 111 7e-24
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 111 9e-24
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 2e-14
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 77 2e-13
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 72 5e-12
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 72 7e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 71 1e-11
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 69 5e-11
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 66 3e-10
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 64 1e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 7e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 57 2e-07
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 49 6e-05
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 41 0.011
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.24
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.73
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 0.97
UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38; Eutel... 35 0.97
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.3
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 1.7
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 2.2
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 3.0
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 3.9
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 32 5.2
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 32 6.8
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 6.8
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 6.8
UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165; Bacter... 31 9.0
UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8; Chlorobi... 31 9.0
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 134 bits (325), Expect = 7e-31
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 232 IVVNLTG 252
IVVNLTG
Sbjct: 61 IVVNLTG 67
Score = 114 bits (275), Expect = 7e-25
Identities = 51/63 (80%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH GGKILG
Sbjct: 68 RLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILG 127
Query: 429 FFF 437
FFF
Sbjct: 128 FFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 128 bits (309), Expect = 6e-29
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 232 IVVNLTG 252
IVVNLTG
Sbjct: 184 IVVNLTG 190
Score = 103 bits (246), Expect = 2e-21
Identities = 46/63 (73%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH GGKILG
Sbjct: 191 RLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILG 250
Query: 429 FFF 437
FFF
Sbjct: 251 FFF 253
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 114 bits (275), Expect = 7e-25
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +1
Query: 73 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 252
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Score = 85.4 bits (202), Expect = 5e-16
Identities = 38/57 (66%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 419
+LNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 113 bits (271), Expect = 2e-24
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 232 IVVNLTG 252
IVV L G
Sbjct: 61 IVVELNG 67
Score = 108 bits (259), Expect = 7e-23
Identities = 48/63 (76%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LG
Sbjct: 68 RLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLG 127
Query: 429 FFF 437
FF+
Sbjct: 128 FFY 130
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 111 bits (267), Expect = 7e-24
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 232 IVVNLT 249
+VV LT
Sbjct: 60 MVVYLT 65
Score = 103 bits (246), Expect = 2e-21
Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGKILG
Sbjct: 67 RLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILG 126
Query: 429 FFF 437
FFF
Sbjct: 127 FFF 129
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 111 bits (266), Expect = 9e-24
Identities = 53/69 (76%), Positives = 59/69 (85%)
Frame = +1
Query: 46 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 225
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 226 GKIVVNLTG 252
GK+VVNLTG
Sbjct: 157 GKMVVNLTG 165
Score = 100 bits (240), Expect = 1e-20
Identities = 44/62 (70%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH GG+ILG
Sbjct: 166 RLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILG 225
Query: 429 FF 434
FF
Sbjct: 226 FF 227
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 2e-14
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +1
Query: 46 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 183
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 43.6 bits (98), Expect(2) = 2e-14
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 184 GYIGEFEIVDDHRAGKIVVNLTG 252
GYI EFE +DDHRAGKIVV L G
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNG 129
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 77.0 bits (181), Expect = 2e-13
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 232 IVVNLTG 252
I+V L G
Sbjct: 61 IIVQLLG 67
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 419
++NKCG ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +GG
Sbjct: 68 RINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGV 127
Query: 420 ILGFFF 437
LG+ +
Sbjct: 128 TLGYVY 133
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 72.1 bits (169), Expect = 5e-12
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
+LN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++GGKILG
Sbjct: 66 RLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILG 125
Query: 429 FFF 437
+F+
Sbjct: 126 YFY 128
Score = 58.0 bits (134), Expect = 9e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +1
Query: 70 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 249
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 250 G 252
G
Sbjct: 65 G 65
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 71.7 bits (168), Expect = 7e-12
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 232 IVVNLTG 252
V L G
Sbjct: 61 YRVQLLG 67
Score = 64.9 bits (151), Expect = 8e-10
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
++NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +GG+++
Sbjct: 68 RINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIA 127
Query: 429 FFF 437
+ +
Sbjct: 128 YVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
++N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++GG++LG
Sbjct: 67 RVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLG 126
Query: 429 FFF 437
FF+
Sbjct: 127 FFY 129
Score = 68.5 bits (160), Expect = 6e-11
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +1
Query: 67 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 246
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 247 TG 252
G
Sbjct: 65 QG 66
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.9 bits (161), Expect = 5e-11
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
++NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K +GG++L
Sbjct: 68 RINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLA 127
Query: 429 FFF 437
+ +
Sbjct: 128 YVY 130
Score = 62.9 bits (146), Expect = 3e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 232 IVVNLTG 252
V L G
Sbjct: 61 YSVTLVG 67
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 66.1 bits (154), Expect = 3e-10
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 431
+N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +GGK+L +
Sbjct: 68 INNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAY 127
Query: 432 FF 437
+
Sbjct: 128 VY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 64.1 bits (149), Expect = 1e-09
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 LNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 431
+N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +GG+++ +
Sbjct: 86 INECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAY 145
Query: 432 FF 437
+
Sbjct: 146 VY 147
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +1
Query: 46 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 225
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 226 GKIVVNLTGS 255
GK V L G+
Sbjct: 76 GKFEVELKGA 85
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1
Query: 61 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 240
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 241 NLTGS 255
L+G+
Sbjct: 63 ELSGN 67
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 LNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 431
+N CG I PRF + + E + LP+R FG L+++T+ G+M ++AR++ LGG +L +
Sbjct: 68 INDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAY 127
Query: 432 FF 437
+
Sbjct: 128 VY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILG 428
++ KCG ISPRF V + W LPS G LV+TT+ G+M H EA + +GG ++G
Sbjct: 68 KITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIG 127
Query: 429 FFF 437
+ +
Sbjct: 128 YVY 130
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 52 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 231
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 232 IVVNL 246
V+L
Sbjct: 61 FSVHL 65
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 48.8 bits (111), Expect = 6e-05
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 NKCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 434
N+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +GG ++ +
Sbjct: 69 NEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYV 128
Query: 435 F 437
+
Sbjct: 129 Y 129
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +1
Query: 64 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 237
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R GKI+
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKII 60
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 41.1 bits (92), Expect = 0.011
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 190 IGEFEIVDDHRAGKIVVNLTGS*TSVVS 273
IG+FE++DDHRAGKIV NL+ T V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.24
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 282 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 437
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.73
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 64 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 207
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 0.97
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 70 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 201
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38;
Euteleostomi|Rep: F-box/LRR-repeat protein 5 - Homo
sapiens (Human)
Length = 691
Score = 34.7 bits (76), Expect = 0.97
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 216 SQSWQDCCKSHRQLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 368
S SW CC+S R L+ G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 437
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 1.7
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKIL 425
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.5 bits (73), Expect = 2.2
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 252 QLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 431
Q+ C +++P D IN + + +L +GY+V+TT G++DHEE G +LG+
Sbjct: 136 QIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLLGY 184
Query: 432 F 434
F
Sbjct: 185 F 185
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.0
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3
Query: 127 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 11
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.0
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 55 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 225
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 33.1 bits (72), Expect = 3.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 437
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 3.9
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 437
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 32.3 bits (70), Expect = 5.2
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 160 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGS 255
F+TV MK G+FEIVD+ G+I V+L GS
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGS 31
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 31.9 bits (69), Expect = 6.8
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 70 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 237
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 238 VNLTGS*TSVVSFHLVLMFPSTILKDGLIC 327
+ + L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKIL 425
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 336 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 431
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
>UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165;
Bacteria|Rep: 30S ribosomal protein S8 - Gloeobacter
violaceus
Length = 133
Score = 31.5 bits (68), Expect = 9.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 437
G +++TS G+M +ARR +GG++L + F
Sbjct: 103 GIAIISTSQGVMTDRDARRAGVGGEVLCYVF 133
>UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8;
Chlorobiaceae|Rep: 30S ribosomal protein S8 - Chlorobium
tepidum
Length = 131
Score = 31.5 bits (68), Expect = 9.0
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 345 GYLVLTTSGGIMDHEEARRKHLGGKIL 425
G +L+TS GI+ +EAR +++GG++L
Sbjct: 101 GLFILSTSKGILTDKEAREQNVGGEVL 127
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,513,837
Number of Sequences: 1657284
Number of extensions: 7576683
Number of successful extensions: 15629
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 15326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15614
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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