Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30520.Seq
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.55 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   2.2  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   3.9  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   5.1  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    23   6.8  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   6.8  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   6.8  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   6.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.55
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -1

Query: 162 KLNDDFGTGPDEDLSFPSLFS 100
           +L DDF TGPD + + P++FS
Sbjct: 609 ELRDDFPTGPDPNFN-PNIFS 628


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 49  AMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKV 150
           A+  +N+L+ +      A+KR + Q L+R C K+
Sbjct: 598 ALRTLNLLNRSTDHALLAQKRQEHQRLVRECDKI 631


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 231 DCCKSHRQLNKCGVISPRFDVPINDIER 314
           D C  + +  +CG   P+    +ND+ +
Sbjct: 33  DLCGPNEEFQECGTACPKTCADLNDLPK 60


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 291 VPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 425
           V +ND+ERW + +        VL  SG  +  +E R   + G ++
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGIDILGDVV 348


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 231 DCCKSHRQLNKCGVISPRFDVPIND 305
           D C  + +L +CG   P+    +ND
Sbjct: 33  DLCGPNEELLECGTACPKTCADLND 57


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 303 DIERWTNLLPSRQFGYLVLTTSGGIMDHEE 392
           D   W N       G LVL +  G++D ++
Sbjct: 198 DFNEWLNRWAFETMGVLVLDSRLGVLDKDQ 227


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 288 DVPINDIERWTN 323
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 288 DVPINDIERWTN 323
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,770
Number of Sequences: 2352
Number of extensions: 8253
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)