Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30518.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 162 6e-39
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 132 1e-29
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 112 7e-24
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 100 7e-20
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 66 1e-09
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 42 0.019
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 37 0.41
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 36 0.96
UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1; Tricho... 36 1.3
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 34 2.9
UniRef50_A0ECR1 Cluster: Chromosome undetermined scaffold_9, who... 33 5.1
UniRef50_UPI0000E80F0E Cluster: PREDICTED: similar to XHRIP110; ... 33 6.7
UniRef50_Q2AG19 Cluster: Thiamine pyrophosphokinase; n=1; Haloth... 33 8.9
UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 162 bits (394), Expect = 6e-39
Identities = 74/110 (67%), Positives = 85/110 (77%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
L +G+ +E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 413 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + F+VRGGMRAVEFKVVE
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVE 167
Score = 99.1 bits (236), Expect = 9e-20
Identities = 47/63 (74%), Positives = 60/63 (95%)
Frame = +3
Query: 72 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 251
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 252 RRK 260
RR+
Sbjct: 64 RRE 66
Score = 35.9 bits (79), Expect = 0.96
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 561 KTDPSPFCIVGSXYRNTL*R*TD*NVKKK--KEH*NAVXYDDIXGCRK 698
+TDPSP+CIV +T+ +K++ +E N V YDDI GCRK
Sbjct: 167 ETDPSPYCIVAP---DTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 132 bits (318), Expect = 1e-29
Identities = 58/110 (52%), Positives = 74/110 (67%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
L +G+ + TVCI + DD CP EKI+M D + I PC V YG RVH+L
Sbjct: 49 LVKGKKHRSTVCIAMEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLL 108
Query: 413 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
PIDD+VE LTG+LFE +LKPYF+E+YRP+ + F+ RG MR+VEFKVVE
Sbjct: 109 PIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGAMRSVEFKVVE 158
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +3
Query: 120 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRR 257
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ R
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHR 56
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 112 bits (270), Expect = 7e-24
Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
L +G+ T+CI+L+D++ + KIR+ D+V + CP + YGK++ +L
Sbjct: 59 LIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVL 118
Query: 413 PIDDSVEGLT-GNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
PIDD++EGL LFE++LKPYF E+YRP+ + F+VRGG +VEFKVVE
Sbjct: 119 PIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVE 169
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +3
Query: 75 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 254
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 99.5 bits (237), Expect = 7e-20
Identities = 47/63 (74%), Positives = 59/63 (93%)
Frame = +3
Query: 69 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 248
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 249 RRR 257
+RR
Sbjct: 60 KRR 62
Score = 69.3 bits (162), Expect = 8e-11
Identities = 46/110 (41%), Positives = 60/110 (54%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
+ +G+ ++TVCIVLSDD D+KIR+ V+ RV
Sbjct: 55 MLKGKKRRDTVCIVLSDDTVTDDKIRVNRV--------------------VRSNLRVR-- 92
Query: 413 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
+ D V L F+VYL+PYF EAYRP+ + F +RGGMRAVEFKVVE
Sbjct: 93 -LGDIVRNL----FDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFKVVE 137
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 561 KTDPSPFCIVGSXYRNTL*R*TD*NVKKK--KEH*NAVXYDDIXGCRK 698
+TDP P+CIV +T+ +K++ +E+ N + YDDI GCRK
Sbjct: 137 ETDPGPYCIVSP---DTVIHFEGDAIKREDEEENLNEIGYDDIGGCRK 181
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
L +G+ ++TV I +S+ E + M D ++I P S+ +VHIL
Sbjct: 51 LLEGKNNKKTVAIAISNRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHIL 109
Query: 413 PIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVV 559
P DS+ G NL + YL PYF++AYRP+ + F+V+ + +EFK++
Sbjct: 110 PFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCFVVKMA-KEIEFKII 158
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 132 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRRKPFA 269
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK +K A
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVA 62
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 129 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRRKPFA 269
P+ +VE DN + LS+AKME+L L G TVLLKGK++++ A
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLA 317
Score = 39.1 bits (87), Expect = 0.10
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 233 LAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 412
L +G+ +E + I D + + +D++ I P V + V +
Sbjct: 306 LLKGKKKKEMLAIAKLDRRLQKHFVVISFAMKKNLRLMHNDIIKIFPLMKVHPLRTVVLS 365
Query: 413 PIDDSVEGLT-GNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
P D+V GL+ L + L+PY ++P+ T + R VEF+VV+
Sbjct: 366 PFSDTVGGLSKAELEQEVLRPYLKGTFKPLCEGTNVYIPHKGRKVEFRVVK 416
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 37.1 bits (82), Expect = 0.41
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 132 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 248
NR IV + D+S + LS K+ L LF+GD V LKG+
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGR 50
Score = 33.5 bits (73), Expect = 5.1
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 27/96 (28%)
Frame = +2
Query: 353 DVVSIAPCPSVKYGKRVHILPIDDSVEGL-----------------------TGNLFEVY 463
D+V + P ++ Y KR+ ++P + +EGL T +LF++
Sbjct: 86 DIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAPAPFPGPTYDLFDIC 145
Query: 464 LKPYFMEAYRPIHRDTPFMVRGGM----RAVEFKVV 559
+ PYF + RP+ F V R +EFKVV
Sbjct: 146 IAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVV 181
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 35.9 bits (79), Expect = 0.96
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 129 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRRKPFA 269
PN +VE + DN + +S+ KM++L + G TVLLKGK++++ A
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVA 148
>UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 2005
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/111 (24%), Positives = 48/111 (43%)
Frame = +2
Query: 230 SLAQGQTPQETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHI 409
S+ Q Q V I D PD IR+ + V I+ + + V +
Sbjct: 38 SVRNQQNSQTLVAIQGCD--MPDNVIRLSRCHRINIGSFLGETVKISKPIKSQKAEIVLV 95
Query: 410 LPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVE 562
PI D++ G++GN ++ + + P++ + F V R VEF+V++
Sbjct: 96 APIADTINGISGNFCDLIQESSYKFNNFPVYPNFIFPVYTMQRVVEFQVIK 146
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +2
Query: 254 QETVCIVL--SDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 427
+E++ + L S + CP I++ V + V V I + ++
Sbjct: 44 KESILVKLYSSKEECPIANIQIPRAVRNNIHCFLGQTVVVEAAEKVAKADDVIISAVSET 103
Query: 428 VEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVV 559
++G+ G++ ++ + PI RD V R +EFKVV
Sbjct: 104 IDGIDGSIIDLLYASNYDFVGMPIRRDQIIPVYALNRVIEFKVV 147
>UniRef50_A0ECR1 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2087
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 464 LKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVENRSITIL 583
+ P F EA++ I + TP ++ GG + +F++ + SI +L
Sbjct: 1549 ISPLFDEAFKDILKITPMLIDGGQKTGQFRIGVDTSIAVL 1588
>UniRef50_UPI0000E80F0E Cluster: PREDICTED: similar to XHRIP110;
n=1; Gallus gallus|Rep: PREDICTED: similar to XHRIP110 -
Gallus gallus
Length = 667
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 592 PTMQNGDGSVFDHFELDGAHAPADHERCVTMDRTVSLHEVRLQVYF 455
P GDGS D +G H PADH C DR E+ L +
Sbjct: 582 PMQAGGDGSA-DRTLSEGNHMPADHVPCPLCDRGFPAAEIELHAMY 626
>UniRef50_Q2AG19 Cluster: Thiamine pyrophosphokinase; n=1;
Halothermothrix orenii H 168|Rep: Thiamine
pyrophosphokinase - Halothermothrix orenii H 168
Length = 215
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 386 KYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDTPFMVRGGMRAVEFKVVEN 565
K G R ILP+DD V G++ F+ LK + Y+ R + K+VEN
Sbjct: 151 KQGARFSILPLDDRVSGVSLKGFKYPLKNAILNRYK-------------TRGISNKIVEN 197
Query: 566 RSITILHRGLLI 601
++ + +GLL+
Sbjct: 198 KATVKVEKGLLM 209
>UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 413
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 395 KRVHILPIDDSV-EGLTGNLFEVYLKPYFME-AYRPIHRDTPFMVRGGMRAVEFKVV 559
KR+H++P D++ + + ++F+ YLKP+ + P F G V+FK++
Sbjct: 202 KRIHVMPFSDTLPQTYSFDIFQDYLKPFLSRYTFHPFSEGESFTYNG----VQFKII 254
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,805,313
Number of Sequences: 1657284
Number of extensions: 13914561
Number of successful extensions: 35136
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35127
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -