Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30518.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -1

Query: 230 CVTTEELKLLHFGL*KCHD*VVIADCFFDNETVGSVLATEDR 105
           CV+ E L +    L  CH  VV   C  +       L TEDR
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRCLCEYLYKQLELHTEDR 342


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 PYFMEAYRPIHRDTPFMVRGGMRAVE 547
           PY  EA   IH+D P     G+R ++
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLK 145


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 PYFMEAYRPIHRDTPFMVRGGMRAVE 547
           PY  EA   IH+D P     G+R ++
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLK 145


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 PYFMEAYRPIHRDTPFMVRGGMRAVE 547
           PY  EA   IH+D P     G+R ++
Sbjct: 120 PYRYEAVAVIHKDLPINNVQGLRGLK 145


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 85 LLLSAILFKIYC*NLRTIIIFIT 17
          +LLS+  F++    L TI+IF+T
Sbjct: 1  MLLSSAWFEVIAAVLLTILIFVT 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,679
Number of Sequences: 438
Number of extensions: 3849
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)