Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30514.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.79 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.79 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +1

Query: 79  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEK 252
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++   +++++ E 
Sbjct: 472 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 531

Query: 253 AQKPK 267
           A++ +
Sbjct: 532 ARRER 536


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +1

Query: 79  GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSM--YDKSEWEEK 252
           G K     K+P++A++L++   R+K+  +    +   I +  G  W ++   +++++ E 
Sbjct: 364 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 423

Query: 253 AQKPK 267
           A++ +
Sbjct: 424 ARRER 428


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 258  KAKEQYIVDLESFNANGGGPV 320
            K   QY V +++FN  G GP+
Sbjct: 1067 KTYTQYSVVVQAFNKVGAGPL 1087


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 569 LFCSITHNKMCFKEYFLYIFSLII 640
           L CSI    M F E+F +   +II
Sbjct: 197 LVCSIKELNMIFNEFFGWPIIMII 220


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 258 LRLFFPFAFVIHGPPD 211
           +++F PF F+ + P D
Sbjct: 490 VKIFLPFRFLFYKPED 505


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 258 LRLFFPFAFVIHGPPD 211
           +++F PF F I+ P D
Sbjct: 490 VKIFLPFRFHIYTPED 505


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 599 TFYYELSNKKXYYLNLSNKSQK 534
           +FY E ++   Y+L +SN + K
Sbjct: 86  SFYLEATDDFAYFLEVSNNNFK 107


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +2

Query: 521 MFFFLSGFCYLDLNNTLFCSITHNKMCFKEYFLYIFSLIINTI*KFTCIFIKVL 682
           +FF +  +    LN  L C+ T  +  ++   LY  S +   +    C F+ VL
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVL 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,188
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)