Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30514.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-14|CAB54448.2| 95|Caenorhabditis elegans Hypothetical... 58 6e-09
AF056576-1|AAC78598.1| 95|Caenorhabditis elegans high mobility... 58 6e-09
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 57 1e-08
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 57 1e-08
Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 46 3e-05
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 46 3e-05
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 41 0.001
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 41 0.001
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 41 0.001
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 41 0.001
U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defe... 37 0.012
U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defe... 37 0.012
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 37 0.012
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 37 0.012
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 37 0.012
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 34 0.085
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 33 0.15
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 33 0.15
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 32 0.34
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 28 5.6
Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC006664-1|AAF39902.2| 298|Caenorhabditis elegans Serpentine re... 28 5.6
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 7.4
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 7.4
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 7.4
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 7.4
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 7.4
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 7.4
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 7.4
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 7.4
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 7.4
Z49907-1|CAA90090.1| 417|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AL110490-14|CAB54448.2| 95|Caenorhabditis elegans Hypothetical
protein Y48B6A.14 protein.
Length = 95
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 85 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKP 264
K + PKR MSA+ W+ R +IK PG+ V ++AK AG W + DKS WE+KA
Sbjct: 23 KDPNAPKRAMSAFFFWMQENRERIK--KPGMGVADVAKAAGVEWGKLTDKSRWEKKAADD 80
Query: 265 K 267
K
Sbjct: 81 K 81
>AF056576-1|AAC78598.1| 95|Caenorhabditis elegans high mobility
group protein 1.1 protein.
Length = 95
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 85 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKP 264
K + PKR MSA+ W+ R +IK PG+ V ++AK AG W + DKS WE+KA
Sbjct: 23 KDPNAPKRAMSAFFFWMQENRERIK--KPGMGVADVAKAAGVEWGKLTDKSRWEKKAADD 80
Query: 265 K 267
K
Sbjct: 81 K 81
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 258
K + PKR SAY+ W ++R+++K+D G V ++AKK G W++M DK +WEEKA+
Sbjct: 551 KDPNAPKRATSAYMQWFLASRNELKED--GDSVADVAKKGGAKWKTMSSDDKKKWEEKAE 608
Query: 259 KPKN 270
+ K+
Sbjct: 609 EDKS 612
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQ 258
K ++PKR +AY++W N+ R+ +K+D G + ++AKKAG W+SM DK EW +KA
Sbjct: 556 KDPNEPKRATTAYIIWFNANRNSMKED--GDTLGDVAKKAGAKWKSMSADDKKEWNDKAA 613
Query: 259 KPK 267
+ K
Sbjct: 614 QDK 616
>Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical
protein F40E10.2 protein.
Length = 212
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 94 DKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 240
D KRPM+A+++W R K+ DNP + +EI+K+ G W+ + ++ +
Sbjct: 46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEK 94
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +1
Query: 79 GFKMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 240
G K D+ KRPM+A+++W R K+ +NP + +EI+K+ G W+ + ++ +
Sbjct: 53 GKKNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEK 106
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +1
Query: 85 KMTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 240
K ++ KRPM+A+++W R KI + P + EI+K+ G WRS+ D+ +
Sbjct: 88 KSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEK 139
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 100 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQKPKN 270
PKR +SA+ + R +I+ +P KV ++A++ G++W+ K +E+KAQ K+
Sbjct: 134 PKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKD 192
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 151 KIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 261
K K N ++VTEI+KK E W++M D K + E AQK
Sbjct: 63 KKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQK 101
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 100 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQKPKN 270
PKR +SA+ + R +I+ +P KV ++A++ G++W+ K +E+KAQ K+
Sbjct: 133 PKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKD 191
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 151 KIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 261
K K N ++VTEI+KK E W++M D K + E AQK
Sbjct: 64 KKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQK 102
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 100 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQKPKN 270
PKR +SA+ + R +I+ +P KV ++A++ G++W+ K +E+KAQ K+
Sbjct: 135 PKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKD 193
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 151 KIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 261
K K N ++VTEI+KK E W++M D K + E AQK
Sbjct: 64 KKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQK 102
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 100 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWR--SMYDKSEWEEKAQKPKN 270
PKR +SA+ + R +I+ +P KV ++A++ G++W+ K +E+KAQ K+
Sbjct: 135 PKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKD 193
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 151 KIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQK 261
K K N ++VTEI+KK E W++M D K + E AQK
Sbjct: 64 KKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQK 102
>U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying
defective protein 13,isoform d protein.
Length = 319
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE---WEEKAQKPK 267
KRPM+A+++W R KI P + + I+K G W+ M + + +EE+++ K
Sbjct: 179 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 236
>U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying
defective protein 13,isoform b protein.
Length = 316
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE---WEEKAQKPK 267
KRPM+A+++W R KI P + + I+K G W+ M + + +EE+++ K
Sbjct: 176 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 233
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE---WEEKAQKPK 267
KRPM+A+++W R KI P + + I+K G W+ M + + +EE+++ K
Sbjct: 282 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 339
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE---WEEKAQKPK 267
KRPM+A+++W R KI P + + I+K G W+ M + + +EE+++ K
Sbjct: 330 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 387
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYDKSE---WEEKAQKPK 267
KRPM+A+++W R KI P + + I+K G W+ M + + +EE+++ K
Sbjct: 330 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSK 387
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 100 PKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQKPK 267
P+RP+ Y+ + K++ +NP ++ +I K G+ W + D KS ++ + + K
Sbjct: 26 PERPLQPYMRYSRKMWPKVRAENPEAQLWDIGKMIGKYWLDLPDGEKSHYQHEYELEK 83
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 224 CMTKANGKKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNKESETGRRG 403
C T +RKSQR+ R + SRR ++ N ++R+ S +G ++ S++GR
Sbjct: 22 CATAKRPANQRKSQRSTKSR--------KSSRRSRRRNGRSRKSSRSGKSSRSSKSGRSS 73
Query: 404 R 406
+
Sbjct: 74 K 74
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 MTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQ 258
MT K + S Y+L+ R +I +NP E++K G W+ + + K +E +A+
Sbjct: 1445 MTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAE 1503
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 MTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQ 258
MT K + S Y+L+ R +I +NP E++K G W+ + + K +E +A+
Sbjct: 1445 MTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAE 1503
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 88 MTDKPKRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWEEKAQ 258
MT K + S Y+L+ R +I +NP E++K G W+ + + K +E +A+
Sbjct: 75 MTPKAVKSKSGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAE 133
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 233 KANGKKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNKESETGRR 400
K KKR+K+Q+ C I K +++R +KKE K++++ E + S++ ++
Sbjct: 49 KKESKKRKKTQKEEDCDSESIKQKKKKARVKKKEVRKSKKDVEDDEDDSNSKSAKK 104
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 200 KQAKSGGPCMTKANGKKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNK 379
K+ + GG +++ KK R +R R R + R RE++E + ++E G + +
Sbjct: 405 KRNRQGGS--QRSSSKKHRDDRRD-RDRERDRNDRDRNREREREERERENRDNERGRRER 461
Query: 380 ESETGRR 400
ESE RR
Sbjct: 462 ESEAPRR 468
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 200 KQAKSGGPCMTKANGKKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNK 379
K+ + GG +++ KK R +R R R + R RE++E + ++E G + +
Sbjct: 405 KRNRQGGS--QRSSSKKHRDDRRD-RDRERDRNDRDRNREREREERERENRDNERGRRER 461
Query: 380 ESETGRR 400
ESE RR
Sbjct: 462 ESEAPRR 468
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 200 KQAKSGGPCMTKANGKKRRKSQRTIHCRFRII*CKWRRSRREKKENPKTREESETGAKNK 379
K+ + GG +++ KK R +R R R + R RE++E + ++E G + +
Sbjct: 399 KRNRQGGS--QRSSSKKHRDDRRD-RDRERDRNDRDRNREREREERERENRDNERGRRER 455
Query: 380 ESETGRR 400
ESE RR
Sbjct: 456 ESEAPRR 462
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
T22H6.6a protein.
Length = 1405
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQKPK 267
+RPM+A++++ R + P ++K GE W S+ K+E+ + A + K
Sbjct: 844 RRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 900
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQKPK 267
+RPM+A++++ R + P ++K GE W S+ K+E+ + A + K
Sbjct: 844 RRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 900
>Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical
protein T22H6.6b protein.
Length = 640
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 103 KRPMSAYLLWLNSARSKIKDDNPGLKVTEIAKKAGEIWRSMY--DKSEWEEKAQKPK 267
+RPM+A++++ R + P ++K GE W S+ K+E+ + A + K
Sbjct: 79 RRPMNAFMIFSKRHRPLVHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVK 135
>AC006664-1|AAF39902.2| 298|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 40 protein.
Length = 298
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 521 MFFFLSGFCYLDLNNTLFCSITHNKMCFKEYFLYIFSLIINTI*KFTCIFIKVLFXWN 694
+FF+ F N L NK C+K ++ ++I++TI F+ F LF W+
Sbjct: 142 VFFYCCDFEIYVPKNCLALGCVMNK-CYKTFWSTYQTVILSTIVLFSFAFCTRLFMWS 198
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2370 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2400
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2349 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2379
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2405 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2435
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2359 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2389
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2359 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2389
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2370 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2400
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2359 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2389
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2349 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2379
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 163 DNPGLKVTEIAKKAGEIWRSMYDKSEWEEKAQKPK 267
DN G KVTE + W +MY + W+ K Q K
Sbjct: 2405 DNQGSKVTEFFDE----WETMYHEMIWQRKLQDRK 2435
>Z49907-1|CAA90090.1| 417|Caenorhabditis elegans Hypothetical
protein B0491.1 protein.
Length = 417
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 566 TLFCSITHNKMCFKEYFLYIFSLI 637
T F +T+NK+C +YF++ L+
Sbjct: 317 TTFAFVTYNKVCTSQYFVWYIVLL 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,697,638
Number of Sequences: 27780
Number of extensions: 233775
Number of successful extensions: 827
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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