Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30512.Seq
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 103 2e-21
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 99 4e-20
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 98 9e-20
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 82 5e-15
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 81 8e-15
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 81 1e-14
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 81 1e-14
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 75 6e-13
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 70 3e-11
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 67 1e-10
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 66 3e-10
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 60 3e-08
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 60 3e-08
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 58 7e-08
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 56 4e-07
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 53 3e-06
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 46 4e-04
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 46 5e-04
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 42 0.006
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 39 0.059
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 38 0.14
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.31
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 35 0.72
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 34 1.7
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 2.9
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 103 bits (247), Expect = 2e-21
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +1
Query: 73 KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
+K + + VTREYTVNLHKRLHG GFKKRAPRAIKEIR FA KQMGTPD+RVDTRLNK
Sbjct: 8 RKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNK 67
Query: 253 F 255
F
Sbjct: 68 F 68
Score = 83.8 bits (198), Expect = 2e-15
Identities = 46/88 (52%), Positives = 50/88 (56%)
Frame = +3
Query: 159 KACPKSNQRNPKXRXKTDGNSGHSSRHSLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSA 338
K P++ + K K G L + LWSKG NDDEDSA
Sbjct: 37 KRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSA 96
Query: 339 HKLFTLVTYVPVASIKGLQTENVDASQE 422
HKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 97 HKLFTLVTYVPVASIKGLQTENVDASQE 124
Score = 35.1 bits (77), Expect = 0.72
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 53 MAKPKGERKGKSAINXLL 106
MAKPKGERKGKSAIN ++
Sbjct: 1 MAKPKGERKGKSAINEVV 18
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 99.1 bits (236), Expect = 4e-20
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = +1
Query: 91 HKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
H+R TREYT+N+HKR+HG GFKKRAPRA+KEIR FA K+MGTPD+R+DTRLNK
Sbjct: 55 HQRGSTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 108
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 97.9 bits (233), Expect = 9e-20
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = +1
Query: 73 KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
KK + + VTREYT+N+HKR+HG GFKKRAPRA+KEIR FA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Score = 56.4 bits (130), Expect = 3e-07
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +3
Query: 159 KACPKSNQRNPKXRXKTDGNSGHSSRHSLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSA 338
K P++ + K K G L + +W+KG N+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 339 HKLFTLVTYVPVASIKGLQTENVD 410
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 82.2 bits (194), Expect = 5e-15
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +1
Query: 46 DNNG*TQR*KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPD 225
D+ +Q+ KK + + VTREYTVNLHKR+H FKKRAPRAIKE+ FA K MGT D
Sbjct: 51 DHKDKSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKD 110
Query: 226 IRVDTRLNK 252
+R+D +LN+
Sbjct: 111 VRLDPKLNQ 119
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 81.4 bits (192), Expect = 8e-15
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +1
Query: 61 TQR*KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDT 240
T+ KK + + VTRE T+NL++RLH G+KKRAPRA+K +R FA K+MGT D+R+DT
Sbjct: 4 TKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDT 63
Query: 241 RLNK 252
RLNK
Sbjct: 64 RLNK 67
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3
Query: 159 KACPKSNQRNPKXRXKTDGNSGHSSRHSLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSA 338
K P++ + K K G + L + LW +G NDDEDS
Sbjct: 37 KRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSP 96
Query: 339 HKLFTLVTYVPVASIKGLQTENVDASQE 422
+KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 97 NKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
VTRE T++L KR+H GFKKRAPRAIKEIR FA ++MGT D+R+DTRLNK
Sbjct: 18 VTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNK 67
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = +3
Query: 159 KACPKSNQRNPKXRXKTDGNSGHSSRHSLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSA 338
K P++ + K + G + L + +WSKG NDDEDS
Sbjct: 37 KRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSP 96
Query: 339 HKLFTLVTYVPVASIKGLQTENVDASQE 422
+KL+T VTYVPV++ K LQTENV++S +
Sbjct: 97 NKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 81.0 bits (191), Expect = 1e-14
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
+TREYT+NLH+RLH FKK+AP+AIKEIR FA K MGT D+RVD +LNK
Sbjct: 12 ITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 61
Score = 38.3 bits (85), Expect = 0.077
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 159 KACPKSNQRNPKXRXKTDGNSGHSSRHSLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSA 338
K PK+ + K K G L + +WSKG NDDED+
Sbjct: 31 KKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAK 90
Query: 339 HKLFTLVTY--VPVASIKGLQTENVD 410
+ F+LVT +P + GL T+ ++
Sbjct: 91 EEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 75.4 bits (177), Expect = 6e-13
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKFFGLRESXMF 282
+TREYT+NLH+RLH FKK+AP+AIKEIR FA K MGT D+RVD +FF L
Sbjct: 12 ITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---EEFFSLVTVAEI 68
Query: 283 PSVSV*GFHEDVM 321
P+ + G V+
Sbjct: 69 PAEGLSGLGTKVI 81
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 69.7 bits (163), Expect = 3e-11
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKFFGLRESXMF 282
VTR YT N+ K + G GFKKR P+A+KEI+ FA K+M T D+R+DTR NK + +
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 283 PSVSV*GFHEDVMMMKI 333
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 6.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 339 HKLFTLVTYVPVASIKGL 392
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 67.3 bits (157), Expect = 1e-10
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 118 TVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKF 255
TVNLHK+ H FKK+APRAI+EI A K MGT D+R+DT LNKF
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKF 57
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 66.5 bits (155), Expect = 3e-10
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +1
Query: 73 KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
KK + VTREYT+N+HKR+H GFK AP A+KEI FA K MGTP+ + T LN
Sbjct: 10 KKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVICT-LNS 68
Query: 253 FF 258
F
Sbjct: 69 LF 70
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKF 255
+TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D LN+F
Sbjct: 46 ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFDMGLNQF 96
Score = 39.9 bits (89), Expect = 0.025
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 243 LKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 419
L Q +WS+G + E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 93 LNQFIWSQGIRSVADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +1
Query: 76 KRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKF 255
K+Q + T+ T+NL K H +K++APRAIKEI+ A K M T D+R+D +LNKF
Sbjct: 29 KKQKKTLKPSTKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKF 88
Score = 40.7 bits (91), Expect = 0.015
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 243 LKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 401
L + +WSKG N+DEDS +++TLV +V V S KGL E
Sbjct: 85 LNKFIWSKGIRNPPKRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/56 (50%), Positives = 34/56 (60%)
Frame = +3
Query: 243 LKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 410
L + +WSKG N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 34 LNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
Score = 41.9 bits (94), Expect = 0.006
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 175 AIKEIRXFAXKQMGTPDIRVDTRLNK 252
A IR FA K+MGTPD+R+DTRLNK
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNK 36
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = +3
Query: 243 LKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 410
L + +W+KG N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 118 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +1
Query: 157 KKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
+K RA+K+IR FA K++GTPD+R+DTRLNK
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNK 120
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = -3
Query: 248 FKRVSTRMSGVPICFXAXFRISLIALGARFLNPXP*SRLCKLTVYSRVT 102
F + R S VP+C A F ISL ALGA FL P + LCKL VYSRVT
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 67 R*KKRQISHKRXVTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRL 246
R ++ + H+R + + + GF++ P +KEIR FA K+MGTPD+ +D
Sbjct: 21 REEEGRFCHQRGRDQRTQPSTFTNVSTSGFREACPSGLKEIRKFAMKEMGTPDVHMDPGF 80
Query: 247 NK 252
NK
Sbjct: 81 NK 82
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKF 255
V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN +
Sbjct: 84 VSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTY 134
Score = 35.1 bits (77), Expect = 0.72
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 240 SLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 410
SL +W KG E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 130 SLNTYIWHKGVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 41.9 bits (94), Expect = 0.006
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 124 NLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLN 249
N+HKR+ G F KR AIKEI+ FA K +IR++ LN
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELN 56
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 38.7 bits (86), Expect = 0.059
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKF 255
+ E+T+ L+K + G KK AP AI+ IR K D+R+D +N F
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVF 53
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 37.5 bits (83), Expect = 0.14
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 109 REYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNK 252
R YT+ L ++ KRAPRAIK+I+ F + M +++D LN+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNE 56
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 36.3 bits (80), Expect = 0.31
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 103 VTREYTVNLHKRLHG 147
VTREYT+NLHKRLHG
Sbjct: 16 VTREYTINLHKRLHG 30
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 35.1 bits (77), Expect = 0.72
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 112 EYTVNLHKRLHGXGFKKRAPRAIKEIRXFAXKQMGTPDIRVDTRLNKFFGLR 267
EYTVNL K + KR +A+K ++ F + +++ LNKF R
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKR 53
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 33.9 bits (74), Expect = 1.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 240 SLKQILWSKGXXXXXXXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 401
SL + +W++G +++D K +TL +VPV + GL+TE
Sbjct: 314 SLNEAVWARGIRNLPRRIRVRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 324 DEDSAHKLFTLVTYVPVASIKGLQTENV 407
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,353,888
Number of Sequences: 1657284
Number of extensions: 6057401
Number of successful extensions: 10780
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10779
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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