Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30509.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   2.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.0  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 56  VEMQILTELSAPYWARATKEWWK 124
           + + +LT L+A YW R    +W+
Sbjct: 3   ISLLVLTLLAAVYWIRQRLAYWE 25


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 455 ACESDIYRSEHATLLSIWHSQWYTN 381
           A  + I R E A  L +W  +W  N
Sbjct: 863 ASRAVIRREERAVTLEVWQREWDAN 887


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
 Frame = -2

Query: 541 PSXGHAARPA---TPPDTVFWHTCR 476
           PS GH+ RPA   TP   V    CR
Sbjct: 282 PSQGHSGRPAYWWTPAIEVLCENCR 306


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 418  PCFPFGTPNGTQTYARKPIRPPASEVS-RVTWTGSRXSR 305
            P  P+G  NGT +    P  PP S  S R+T  G   +R
Sbjct: 1120 PRTPYGLSNGTSS----PALPPKSPTSQRITLPGRYEAR 1154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,944
Number of Sequences: 2352
Number of extensions: 16488
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)