Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30508.Seq
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   144   8e-35
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   144   8e-35
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    29   3.6  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    29   3.6  
BT022187-1|AAY51581.1|  206|Drosophila melanogaster IP01195p pro...    28   8.3  
BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p pro...    28   8.3  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   8.3  
AF046044-2|AAC97604.1|  189|Drosophila melanogaster bZIP transcr...    28   8.3  
AE014298-1587|AAF48022.1|  189|Drosophila melanogaster CG1641-PA...    28   8.3  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   8.3  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  144 bits (348), Expect = 8e-35
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +1

Query: 4   RRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEK 183
           RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
           F+ V IR  V GGGHVAQ+YAIRQ   +
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  124 bits (299), Expect = 7e-29
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
           AISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  144 bits (348), Expect = 8e-35
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +1

Query: 4   RRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEK 183
           RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ + P++LQYKLQEP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
           F+ V IR  V GGGHVAQ+YAIRQ   +
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  124 bits (299), Expect = 7e-29
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
           AISKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 351 LLVADPRRCEPKKFGGPGARARY 419
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 351 LLVADPRRCEPKKFGGPGARARY 419
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>BT022187-1|AAY51581.1|  206|Drosophila melanogaster IP01195p
           protein.
          Length = 206

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +3

Query: 225 SCSTSLRYQTAISKALIAFYQKYVDEASKKE------IKDILVQYDRSLL 356
           SC  S RY   I KA + F  K+V    KK       ++D++ Q +R LL
Sbjct: 136 SCRKS-RYNNKIKKAKLRFRHKFVSGQLKKSAVMLDTMRDVIAQAERQLL 184


>BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p
           protein.
          Length = 733

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +1

Query: 82  HGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQLF 261
           HG+LR  GR   L   + LQY  + PILL    + S + ++ T +   H      +R + 
Sbjct: 321 HGLLRACGR---LTASKTLQYDERHPILLPYDCRLSRLIVQFTHQITLHGGSQLIVRLIR 377

Query: 262 QRL*SPSTRNM 294
            +   P  +N+
Sbjct: 378 TKYWIPKIKNL 388


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
            protein protein.
          Length = 1830

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +1

Query: 82   HGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQLF 261
            HG+LR  GR   L   + LQY  + PILL    + S + ++ T +   H      +R + 
Sbjct: 1418 HGLLRACGR---LTASKTLQYDERHPILLPYDCRLSRLIVQFTHQITLHGGSQLIVRLIR 1474

Query: 262  QRL*SPSTRNM 294
             +   P  +N+
Sbjct: 1475 TKYWIPKIKNL 1485


>AF046044-2|AAC97604.1|  189|Drosophila melanogaster bZIP
           transcription factor protein.
          Length = 189

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +3

Query: 225 SCSTSLRYQTAISKALIAFYQKYVDEASKKE------IKDILVQYDRSLL 356
           SC  S RY   I KA + F  K+V    KK       ++D++ Q +R LL
Sbjct: 119 SCRKS-RYNNKIKKAKLRFRHKFVSGQLKKSAVMLDTMRDVIAQAERQLL 167


>AE014298-1587|AAF48022.1|  189|Drosophila melanogaster CG1641-PA
           protein.
          Length = 189

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +3

Query: 225 SCSTSLRYQTAISKALIAFYQKYVDEASKKE------IKDILVQYDRSLL 356
           SC  S RY   I KA + F  K+V    KK       ++D++ Q +R LL
Sbjct: 119 SCRKS-RYNNKIKKAKLRFRHKFVSGQLKKSAVMLDTMRDVIAQAERQLL 167


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 336 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR*AFKK 449
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,359,724
Number of Sequences: 53049
Number of extensions: 464541
Number of successful extensions: 1375
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)