Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30507.Seq
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 66 3e-11
U39998-7|AAK71422.2| 100|Caenorhabditis elegans Hypothetical pr... 59 3e-09
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 35 0.070
AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical ... 34 0.093
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 32 0.50
AL021175-1|CAA15965.1| 307|Caenorhabditis elegans Hypothetical ... 32 0.50
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 31 1.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 30 1.5
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z49128-3|CAA88958.2| 855|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 29 3.5
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 29 4.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.1
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm rece... 28 8.1
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNNY 431
FKC +CGT+L LKTY NN++ DKEVYCS+HVP GP L +S S N+ +N+
Sbjct: 34 FKCYICGTRLALKTYCNNRNDINDKEVYCSNHVPIAGPHDLPMASTN-GSGKNLENNNHV 92
Query: 432 VN 437
N
Sbjct: 93 KN 94
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 581 SALHIAHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEMKHRQEEDDLYRKFSE 745
S + IAHA+K T++ + Y + + +D D QT+LE+ HR++EDDLY F +
Sbjct: 103 SDMKIAHAMKATQVARPYPKISHEGAKYVVDYDTQTRLELLHRKDEDDLYESFQD 157
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1
Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
C RC + VY D+VGPLKD TFFH GC
Sbjct: 7 CNRCGKQVYPTDKVGPLKDSTFFHQGC 33
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNNY 431
FKC +CGT+L LKTY NN++ DKEVYCS+HVP GP L +S S N+ +N+
Sbjct: 34 FKCYICGTRLALKTYCNNRNDINDKEVYCSNHVPIAGPHDLPMASTN-GSGKNLENNNHV 92
Query: 432 VN 437
N
Sbjct: 93 KN 94
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 581 SALHIAHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEMKHRQEEDDLYRKFSE 745
S + IAHA+K T++ + Y + + +D D QT+LE+ HR++EDDLY F +
Sbjct: 103 SDMKIAHAMKATQVARPYPKISHEGAKYVVDYDTQTRLELLHRKDEDDLYESFQD 157
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1
Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
C RC + VY D+VGPLKD TFFH GC
Sbjct: 7 CNRCGKQVYPTDKVGPLKDSTFFHQGC 33
>U39998-7|AAK71422.2| 100|Caenorhabditis elegans Hypothetical
protein ZK622.4 protein.
Length = 100
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGP 365
FKC +CGT+L+LKTY+NN++ D EVYC+ HVP GP
Sbjct: 32 FKCWICGTRLSLKTYHNNRNDNTDLEVYCAGHVPTPGP 69
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 172 CFRCNEIVYQVDRVGPLKDFTFFHSGC 252
CFRC Y D++GPLKD + FH GC
Sbjct: 5 CFRCKRPTYFNDKMGPLKDGSMFHKGC 31
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 252 FKCAVCGTKLTLKTYYNNQHWTEDKEVYCSSHVPKIGPGHLDNSSVGIRSALNVPKSNN 428
FKC VCG L +K Y DK YC H PK + ++ R A N +N
Sbjct: 32 FKCTVCGMTLNMKNYKG-----YDKRPYCDPHYPKTVASVMADTPEMRRIAENTKNQSN 85
>AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical
protein C41D11.4 protein.
Length = 330
Score = 34.3 bits (75), Expect = 0.093
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +1
Query: 397 EALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGRPTVERPRVSSKGA-IA*YP*LPVREI 573
E+ T P ++S+ S TS +++ + R+G P++ R + S+ + P +P+R I
Sbjct: 13 ESQRTIPPPSSSSSFLSHSTSMVSVAASLKRAGVPSLTRTKTSALPIKMEKKPMVPLR-I 71
Query: 574 RRQRPPHSTRLKANRAPESLPSAERKTYRLLLGSR*ANQT*NETPARRRRFVQEI 738
+ H T ++ APES+PS E + + S + +TP R RR +++
Sbjct: 72 EQD---HQTPIR-KLAPESIPSLEDQVTPPMRRSSSGSMLLRQTPERIRRQEEDV 122
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 322 TKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTSGTAMSQNCLRSG-R 498
T T+ T ++S T +TP SEA ST ITT++ +E+ + T R G
Sbjct: 177 TTMVTSTPTTEKSSTTTTSTP--TSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYGFH 234
Query: 499 PTVERPRV 522
PT+ +V
Sbjct: 235 PTIRNGKV 242
>AL021175-1|CAA15965.1| 307|Caenorhabditis elegans Hypothetical
protein Y6E2A.1 protein.
Length = 307
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 745 FREFPVQIVFFLPVFHFK---FGLLISIQVAVYRFFSRPMV 632
F FPV ++F LP+F K G ++ I VA+Y F P+V
Sbjct: 220 FMYFPVSVMFLLPLFGIKVEELGNIVPISVAIYPCF-EPLV 259
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 608 KQTELQKAYHRPREKPIDCYLDRDEQTK-LEMKHRQEEDDLYRK 736
+Q E+++ R++ I+ + +E+ + LEM+ R+EED+ RK
Sbjct: 344 RQAEVERQAELERQRIIEAQREEEEKKRRLEMERRREEDEKMRK 387
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Frame = +1
Query: 139 KMYRPNFYESTCFRCNEIVYQV---DRVGPLKDFTFFHSGCLSVPCAEPN*P*RPITITS 309
K R + YE++ EI DR+ + T HS +VP P T T+
Sbjct: 212 KCPRGSIYEASDLDAEEIQLACSVDDRIPLFRTTTTTHSSLTAVPGTTEETSTEPETTTT 271
Query: 310 IGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTSTNRSEDTS 459
T+ T +T ++ T+ S +T TT+T S TS
Sbjct: 272 STTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTTTS 321
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +3
Query: 303 NQHWTEDKEVYC--SSHVPKIG--PGHLDNSSVGIRSAL 407
N WT+ KEV C S P IG PG+ DNS V S++
Sbjct: 315 NDVWTKVKEVMCCRSYDPPTIGHMPGYRDNSDVSPASSV 353
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 608 KQTELQKAYHRPREKPIDCYLDRDEQTKLEM---KHRQEEDDLYRK 736
++ E ++A P E+ D Y DE+TK +M K R EED+ +K
Sbjct: 453 EEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 608 KQTELQKAYHRPREKPIDCYLDRDEQTKLEM---KHRQEEDDLYRK 736
++ E ++A P E+ D Y DE+TK +M K R EED+ +K
Sbjct: 453 EEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
>Z49128-3|CAA88958.2| 855|Caenorhabditis elegans Hypothetical
protein M03C11.3 protein.
Length = 855
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +2
Query: 413 AQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALH 592
A+++ +++ TD+RI QP ++ + S A E+ D QY FD +
Sbjct: 756 AERERIKRETDKRIRNRQPAQKSAAATPAHSSSFAVPNAGEVEDDEDGNQYPPFDMNQFE 815
Query: 593 IAHALKQTELQKAYHRPREK 652
+ A+ + +P E+
Sbjct: 816 LDAAVVSRRRFASVEKPFEQ 835
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 608 KQTELQKAYHRPREKPIDCYLDRDEQTKLEM---KHRQEEDDLYRK 736
++ E ++A P E+ D Y DE+TK +M K R EED+ +K
Sbjct: 453 EEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQK 498
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 554 DYQYGRFDASALHIAHALKQTELQKAYHRPREKPIDCYLDRDE---QTKLEMKHRQEEDD 724
D+ AS H L QT+ K Y+R +K + Y++ +E TK E+K +EE D
Sbjct: 233 DFDIETAAASLCHKGRMLAQTDHSKVYYRKFKK--NFYIETEEIRRMTKAEVKAYREELD 290
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 TITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA-ITTSTNR-SEDTSGTAM 471
T+T+ T T+ T S T TTP ++E+ ST P + +TTST S T+G +
Sbjct: 448 TVTT-SPSTSPVTSTVTSSSSSSTTVTTPT-STESTSTSPSSTVTTSTTAPSTSTTGPSS 505
Query: 472 SQN 480
S +
Sbjct: 506 SSS 508
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 298 TITSIGRKTKKYTALATYQRSVRATWTTPQWASEALSTCPKA-ITTSTNR-SEDTSGTAM 471
T+T+ T T+ T S T TTP ++E+ ST P + +TTST S T+G +
Sbjct: 448 TVTT-SPSTSPVTSTVTSSSSSSTTVTTPT-STESTSTSPSSTVTTSTTAPSTSTTGPSS 505
Query: 472 SQN 480
S +
Sbjct: 506 SSS 508
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 TSIGRKTKKYTALATYQRSVRATWTTPQWAS-EALSTCPKAITTSTNRSEDTSGTAMSQN 480
TS G T L+T S +T + P S +ST P A TTS + TSG + S
Sbjct: 505 TSSGPSTVSERTLST--TSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSG 562
Query: 481 CLRSGRPTV 507
+ R TV
Sbjct: 563 PSTASRSTV 571
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 530 RELSRDTPDYQYGRFDASALHIAHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEMKHR 709
R+ R+T Y + A + K+ + +K Y R RE+ D Y E++K + R
Sbjct: 926 RKRDRETEAYDSDKLQAPKTKVKREDKKRDDRKDYERDRERRKDDY--EKEKSKRKESDR 983
Query: 710 QEEDDLYRK 736
E + R+
Sbjct: 984 DNEKEKQRE 992
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +2
Query: 386 SGHQKRSQRAQKQ*LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQY 565
S HQK + A++ + + ++ R S + S+ A+ +D +Y
Sbjct: 44 SAHQKALKDAEENRRQYEESAKRSEQAANERIRSQIDENNKSIEKLRAQFKEQDD---KY 100
Query: 566 GRFDASALHIAHALKQTELQKAYHRPREKPIDCYLDRDEQTKLEMKHRQEEDDLYRKFSE 745
+ +++IAH LK EL+ REK + + E K+E +H++E+ K +
Sbjct: 101 DE-EMKSMNIAHDLKMKELRSESKEAREKAEMEHKMKVE--KVEQEHKKEKHLAQEKLEQ 157
Query: 746 T 748
T
Sbjct: 158 T 158
>AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm
receptor protein 85 protein.
Length = 340
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 219 FEGLHLLS*WMFKCAVCGTKLTLKTYY 299
F+G +LL W+F CA CG + Y+
Sbjct: 123 FDGGYLLC-WVFGCAACGISMVTVKYF 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,484
Number of Sequences: 27780
Number of extensions: 399380
Number of successful extensions: 1223
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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