Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30507.Seq
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.33
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 2.3
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 4.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 4.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 4.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 4.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 4.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 4.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 7.0
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 7.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.3
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.2 bits (55), Expect = 0.33
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +3
Query: 252 FKCAVCG----TKLTLKTYYNNQHWTEDKEVYCS 341
+ C VCG TKLTLK + QH+ C+
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCA 405
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +1
Query: 322 TKKYTALATYQRSVRATWTTPQWASEALSTCPKAITTS 435
T Y +L T + P WA C AITT+
Sbjct: 93 TLTYISLDTNRGGSPKLTPYPNWAQNKAGACGSAITTA 130
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 343 ATYQRSVRATWTTPQWASEALSTCPKAITTST 438
A S T ++PQ + + ST P A TTS+
Sbjct: 56 AQQHNSPSPTGSSPQHSGSSASTSPAARTTSS 87
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/51 (21%), Positives = 21/51 (41%)
Frame = +1
Query: 124 TQIVNKMYRPNFYESTCFRCNEIVYQVDRVGPLKDFTFFHSGCLSVPCAEP 276
T + +++ + + CNE + +V ++F LS PC P
Sbjct: 23 TSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHP 73
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 30 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 87
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 88 EQIPVPVYYGNFPPRPI 104
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.0
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 428 LRQRTDQRIHQEQP*ARTVSDPGDQRWSVHASPARELSRDTPDYQYGRFDASALHIAHAL 607
LR+RT +R + S ++ + + +RE SRD + GR + +H +
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDR--RERGRSREHRIIPSHYI 336
Query: 608 KQTELQKAYHRPREKPI 658
+Q + Y +PI
Sbjct: 337 EQIPVPVYYGNFPPRPI 353
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 123 SRHNYKLHLIHIDANYIWFF 64
+RHN +L H+D + + +F
Sbjct: 312 TRHNATCYLSHVDPDVVQYF 331
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 123 SRHNYKLHLIHIDANYIWFF 64
+RHN +L H+D + + +F
Sbjct: 18 TRHNATCYLSHVDPDVVQYF 37
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 400 ALSTCPKAITTSTNRSEDTSGTAMSQNCLRSGRPTVERPRV 522
A +T ITT+T + T+ T + N ++ T P+V
Sbjct: 653 APATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQV 693
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 312 WTEDKEVYCSSHV 350
WT+D++V CS+ +
Sbjct: 160 WTQDEDVICSTPI 172
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 586 PPHSTRLKANRAPESLPSAERKTY 657
P TRL+ PE+ P R Y
Sbjct: 25 PTRPTRLRREAKPEAEPGNNRPVY 48
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 586 PPHSTRLKANRAPESLPSAERKTY 657
P TRL+ PE+ P R Y
Sbjct: 26 PTRPTRLRREAEPEAEPGNNRPVY 49
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.0
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +3
Query: 312 WTEDKEVYCSSHV 350
WT+D+++ CS+ +
Sbjct: 213 WTQDEDIICSTPI 225
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 590 HIAHALKQTELQKAYHRPR 646
H HA KQTE++ H P+
Sbjct: 341 HGDHAPKQTEVRFKVHDPK 359
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 590 HIAHALKQTELQKAYHRPR 646
H HA KQTE++ H P+
Sbjct: 341 HGDHAPKQTEVRFKVHDPK 359
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 491 PGDQRWSVHASPARELSRDTP 553
PG+Q+ ++ P+R + TP
Sbjct: 1288 PGNQQQTIQTQPSRNNTYSTP 1308
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,107
Number of Sequences: 438
Number of extensions: 5238
Number of successful extensions: 34
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -