Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30505.Seq
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M32405-1|AAA36568.1| 145|Homo sapiens protein ( Human homologue... 124 1e-28
J02984-1|AAA36036.1| 145|Homo sapiens protein ( Human insulinom... 124 1e-28
BC141832-1|AAI41833.1| 145|Homo sapiens ribosomal protein S15 p... 124 1e-28
BC105810-1|AAI05811.1| 145|Homo sapiens ribosomal protein S15 p... 124 1e-28
BC064908-1|AAH64908.1| 145|Homo sapiens ribosomal protein S15 p... 124 1e-28
AF145025-1|AAP97277.1| 145|Homo sapiens insulinoma protein prot... 124 1e-28
>M32405-1|AAA36568.1| 145|Homo sapiens protein ( Human homologue of
rat insulinoma gene (rig), exons 1-4. ).
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>J02984-1|AAA36036.1| 145|Homo sapiens protein ( Human insulinoma
rig-analog mRNA encoding DNA-binding protein, complete
cds. ).
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>BC141832-1|AAI41833.1| 145|Homo sapiens ribosomal protein S15
protein.
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>BC105810-1|AAI05811.1| 145|Homo sapiens ribosomal protein S15
protein.
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>BC064908-1|AAH64908.1| 145|Homo sapiens ribosomal protein S15
protein.
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
>AF145025-1|AAP97277.1| 145|Homo sapiens insulinoma protein
protein.
Length = 145
Score = 124 bits (300), Expect = 1e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 254 QMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 427
+MVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88 EMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 111 bits (267), Expect = 1e-24
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVXKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+ +LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRXMIIVP 254
APP EKPE+VKTHLR MII+P
Sbjct: 67 APPMEKPEVVKTHLRDMIILP 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,193,546
Number of Sequences: 237096
Number of extensions: 1155519
Number of successful extensions: 2084
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2084
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -