Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30504.Seq
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 132 3e-30
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 124 1e-27
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 103 3e-21
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 101 1e-20
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 86 5e-16
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 85 9e-16
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 80 3e-14
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 78 1e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 75 1e-12
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 69 5e-11
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 62 6e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 55 1e-06
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 5e-06
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 44 0.002
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 42 0.008
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 42 0.008
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 41 0.020
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 39 0.079
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 38 0.18
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 36 0.42
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 36 0.42
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 36 0.42
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 35 0.97
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 35 0.97
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 34 2.2
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 33 3.9
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 33 3.9
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 33 5.2
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 33 5.2
UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep: ... 32 9.0
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.0
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 132 bits (320), Expect = 3e-30
Identities = 58/80 (72%), Positives = 73/80 (91%)
Frame = +3
Query: 15 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKF 194
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 195 SMVXIRVTVKGGGHVAQVYA 254
+ V IRV VKGGGHVAQ+YA
Sbjct: 64 AGVDIRVRVKGGGHVAQIYA 83
Score = 124 bits (298), Expect = 2e-27
Identities = 56/62 (90%), Positives = 61/62 (98%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
RQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 85 RQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Query: 437 YR 442
YR
Sbjct: 145 YR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 124 bits (299), Expect = 1e-27
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
RQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKS
Sbjct: 87 RQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKS 146
Query: 437 YR 442
YR
Sbjct: 147 YR 148
Score = 122 bits (295), Expect = 4e-27
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = +3
Query: 9 ARRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKE 188
A + IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 189 KFSMVXIRVTVKGGGHVAQVYA 254
+F+ V IR+ VKGGG+VAQ+YA
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYA 85
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 103 bits (246), Expect = 3e-21
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
RQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKS
Sbjct: 94 RQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKS 153
Query: 437 YR 442
YR
Sbjct: 154 YR 155
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 162 EPILLLGKEKFSMVXIRVTVKGGGHVAQVYA 254
EP+L++G +KF+ V IRV V GGGH +QVYA
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYA 92
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 101 bits (242), Expect = 1e-20
Identities = 44/77 (57%), Positives = 62/77 (80%)
Frame = +3
Query: 24 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 203
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 204 XIRVTVKGGGHVAQVYA 254
IRV V GGGHV+QVYA
Sbjct: 64 DIRVRVTGGGHVSQVYA 80
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
RQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKS
Sbjct: 82 RQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKS 141
Query: 437 YR 442
YR
Sbjct: 142 YR 143
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +2
Query: 224 GWWSCSTSLRFRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 403
G + S RQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 404 GPGARARYQKSYR 442
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 78.2 bits (184), Expect = 1e-13
Identities = 31/56 (55%), Positives = 48/56 (85%)
Frame = +3
Query: 30 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFS 197
+V FG+KKTATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 85.8 bits (203), Expect = 5e-16
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKS
Sbjct: 84 RMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKS 143
Query: 437 YR 442
YR
Sbjct: 144 YR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 85.0 bits (201), Expect = 9e-16
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = +2
Query: 224 GWWSCSTSLRFRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 403
G S + RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 404 GPGARARYQKSYR 442
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 65.3 bits (152), Expect = 8e-10
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 200
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 201 VXIRVTVKGGGHVAQVYAS 257
+ I V V GGG V+Q YA+
Sbjct: 69 LRIDVAVHGGGQVSQAYAA 87
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 79.8 bits (188), Expect = 3e-14
Identities = 49/145 (33%), Positives = 68/145 (46%)
Frame = +3
Query: 24 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 203
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 204 XIRVTVKGGGHVAQVYASDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 383
I V VKG GHV Q+YA + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 384 XXXXXXXXXXXXXDTRNLTVKPSRK 458
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = +3
Query: 6 EARRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGK 185
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 186 EKFSMVXIRVTVKGGGHVAQVYASDKLFQR 275
F + + + V GGGHV+Q+YA + R
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISR 105
Score = 77.4 bits (182), Expect = 2e-13
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2
Query: 257 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 436
RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKS
Sbjct: 100 RQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKS 156
Query: 437 YR 442
YR
Sbjct: 157 YR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +2
Query: 218 SQGWWSCSTSLRFRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 397
S+G S RQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 398 FGGPGARARYQKSYR 442
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = +3
Query: 33 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIR 212
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 213 VTVKGGGHVAQVYA 254
+ KGGG V+Q+YA
Sbjct: 63 IFSKGGGKVSQIYA 76
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 69.3 bits (162), Expect = 5e-11
Identities = 28/78 (35%), Positives = 53/78 (67%)
Frame = +3
Query: 24 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 203
++ +Q G++KTA A A + G G +R+NG+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 204 XIRVTVKGGGHVAQVYAS 257
I V V+GGG + Q A+
Sbjct: 61 DIDVKVQGGGFMGQAEAA 78
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 275 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 442
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 62.5 bits (145), Expect = 6e-09
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPRLLQYKLQEPILLLGKEK 191
+ P+Q+ QVFG KK A +A +G +++V L++ P QY+L +PIL LGKE+
Sbjct: 23 KGPLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKER 80
Query: 192 FSMVXIRVTVKGGGHVAQVYA 254
F+ V I V V G G VAQ+YA
Sbjct: 81 FARVGIWVRVNGVGRVAQIYA 101
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 224
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 225 GGGHVAQVYA 254
GGG + Q A
Sbjct: 71 GGGVMGQADA 80
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 9/71 (12%)
Frame = +2
Query: 257 RQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGP 409
R AI++ L+ F++ + +D+ S+ +++ +++DR++LV DPRR EP+K+
Sbjct: 82 RMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRY 140
Query: 410 GARARYQKSYR 442
AR R+QKSYR
Sbjct: 141 SARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 308 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 442
+ ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 15 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRV 107
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVXPRLLQYKLQEPILLLGKEKFSMVXIRVT 218
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E I V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 219 VKGGGHVAQVYA 254
V GGG AQ A
Sbjct: 69 VLGGGFAAQADA 80
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 41.9 bits (94), Expect = 0.008
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+KT+ A G G + VNG P L+ L L++P++ G EK I VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 222 KGGGHVAQVYAS 257
KGGG Q A+
Sbjct: 69 KGGGFTGQAGAT 80
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 41.9 bits (94), Expect = 0.008
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 222 KGGG 233
KGGG
Sbjct: 66 KGGG 69
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 33 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILL-LGKEKFSMVX 206
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 207 IRVTVKGGGHVAQVYA 254
+ V GGG +Q A
Sbjct: 67 --IKVSGGGINSQAEA 80
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 38.7 bits (86), Expect = 0.079
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+KT++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 222 KGGGHVAQVYA 254
+GGG Q A
Sbjct: 71 QGGGDSGQAGA 81
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 37.5 bits (83), Expect = 0.18
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+KTA A K G G L +NG+ L D + + ++ P L E F V + V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 222 KGGGHVAQVYA 254
GGG Q A
Sbjct: 139 TGGGTTGQTGA 149
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 36.3 bits (80), Expect = 0.42
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 224
G++KT++AV + G G + VNG+ L PR L + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 225 GGGHVAQVYA 254
GGG Q A
Sbjct: 254 GGGVTGQAEA 263
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 36.3 bits (80), Expect = 0.42
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+K A G G + NGR L+ P +L Q ++ P++LLG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 222 KGGGHVAQVYA 254
GGG Q A
Sbjct: 120 GGGGPTGQAGA 130
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 36.3 bits (80), Expect = 0.42
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQ-YKLQEPILLLGKEKFSM 200
IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 6 IQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVNSFD 65
Query: 201 VXIRVTVKGGGHVAQVYAS 257
+ IRV+ GGG QV A+
Sbjct: 66 LIIRVS--GGGVQGQVIAT 82
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 35.1 bits (77), Expect = 0.97
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+K + A + K+G G + VNGR +D + ++ P ++ + + +R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 222 KGGGHVAQVYA 254
GGGH Q A
Sbjct: 87 AGGGHTGQAGA 97
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 35.1 bits (77), Expect = 0.97
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPR-LLQYKLQEPILLLG-KEKFSMVXIRV 215
GR+KT+ A G+G +NG ++ + + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 216 TVKGGGHVAQVYA 254
VKGGG V QV A
Sbjct: 77 KVKGGGLVGQVNA 89
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 33.9 bits (74), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRVTV 221
GR+K + A G G + +NGR LD L+ +++P++ G E +RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 222 KGGGHVAQVYA 254
GGG Q A
Sbjct: 68 DGGGFTGQAGA 78
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 33.1 bits (72), Expect = 3.9
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 224
GR+K + A + + G G +VN + D+ P +L ++ L + I+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 225 GGGHVAQVYASDKLFQRL*SPSTRNM*T 308
GGG + F R P +M T
Sbjct: 82 GGGTTGKTSPQSLRFLRRLVPKFSDMRT 109
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 33.1 bits (72), Expect = 3.9
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 9 ARRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILL 176
ARR P+ + VF R ++ V K G G+ + G LD P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPIL-LLGKEKFSMVXIRVTV 221
G++K ++AV G G + VNG+ L+ PRL + + + L + + TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 222 KGGGHVAQVYA 254
+GGG Q A
Sbjct: 159 RGGGVTGQAEA 169
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 32.7 bits (71), Expect = 5.2
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 45 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQY--KLQEPILLLGKEKFSMVXIRVT 218
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + I V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 219 VKGGGHVAQ 245
+GGG Q
Sbjct: 75 AEGGGLTGQ 83
>UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep:
U2266c - Mycobacterium leprae
Length = 146
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 414 APGPPNFLGSQRRGSATSKLLSYCTRMSLISFFEASSTYFW 292
A GP N + S R G T+ LLS T ++F TY W
Sbjct: 101 ALGPQNCIHSSRTGQTTAHLLSEHTETCCLTFVPIRWTYVW 141
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 353 RSLLVADPRRCEPKKFGGPGARARY 427
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 48 RKKTATAVAYCKRGHGMLRV-NGRPLDLVXPRLLQYKLQEP 167
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,510,217
Number of Sequences: 1657284
Number of extensions: 10526804
Number of successful extensions: 25589
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 24971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25583
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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